RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 COQ2Q96H96 371 aa11.56□□□□□ -0.56
HDAC6-224ENST00000481929 NIPSNAP1Q9BPW8 284 aa11.56□□□□□ -0.56
HDAC6-224ENST00000481929 OR51J1Q9H342 316 aa11.56□□□□□ -0.56
HDAC6-224ENST00000481929 HMG20AQ9NP66 347 aa11.56□□□□□ -0.56
HDAC6-224ENST00000481929 COPS3Q9UNS2 423 aa11.56□□□□□ -0.56
HDAC6-224ENST00000481929 TNCP24821 2201 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 IGHV1-3A0A0C4DH29 117 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 GAPDHP04406 335 aaKnown RBP11.55□□□□□ -0.56
HDAC6-224ENST00000481929 IGF1P05019 195 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 CCL1P22362 96 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 SLC2A5P22732 501 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 SOX6P35712 828 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 GLP1RP43220 463 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 KIR3DL2P43630 455 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 MTNR1BP49286 362 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 ATP1B3P54709 279 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 SLURP1P55000 103 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 ZNF816Q0VGE8 651 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-224ENST00000481929 KIAA0141Q14154 515 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-224ENST00000481929 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-224ENST00000481929 ARPC1AQ92747 370 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 OR4C12Q96R67 309 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 S1PR3Q99500 378 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 CHST5Q9GZS9 411 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 KLK15Q9H2R5 256 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 REEP1Q9H902 201 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 CALYQ9NYX4 217 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 IDI2-AS1Q9NZ38 188 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 ZNF580Q9UK33 172 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 SAMHD1Q9Y3Z3 626 aaKnown RBP11.55□□□□□ -0.56
HDAC6-224ENST00000481929 SNX5Q9Y5X3 404 aa11.55□□□□□ -0.56
HDAC6-224ENST00000481929 MAGEA13PA6NCF6 341 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 HSPA12AO43301 675 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 CCDC22O60826 627 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 SERPINA3P01011 423 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 HMGN1P05114 100 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 HSD17B1P14061 328 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 REG1BP48304 166 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 RBP2P50120 134 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 ACTR3P61158 418 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 PITPNAQ00169 270 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 SCN1BQ07699 218 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 GINS1Q14691 196 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 LTC4SQ16873 150 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 PLEKHG7Q6ZR37 379 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 PGAM4Q8N0Y7 254 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 APOL4Q9BPW4 351 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 CHCHD6Q9BRQ6 235 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 COMMD4Q9H0A8 199 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 PPIL3Q9H2H8 161 aaKnown RBP11.54□□□□□ -0.56
HDAC6-224ENST00000481929 PLSCR3Q9NRY6 295 aa11.54□□□□□ -0.56
HDAC6-224ENST00000481929 LINC01619G3V211 115 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 SYT7O43581 403 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 MOSP00540 346 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 IL1AP01583 271 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 CGB3P0DN86 165 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 CGB7P0DN87 165 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 ARSBP15848 533 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 MAGEA2P43356 314 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 ODF4Q2M2E3 257 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 ZNF322Q6U7Q0 402 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-224ENST00000481929 ZNF565Q8N9K5 539 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 CHST4Q8NCG5 386 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 DNAAF1Q8NEP3 725 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 OR8H1Q8NGG4 311 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 CMTM5Q96DZ9 223 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 OSBPL10Q9BXB5 764 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 ACTR3BQ9P1U1 418 aa11.53□□□□□ -0.56
HDAC6-224ENST00000481929 SLC33A1O00400 549 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-224ENST00000481929 LY6G6CO95867 125 aa11.52□□□□□ -0.57
HDAC6-224ENST00000481929 C21orf33P30042 268 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-224ENST00000481929 PPIFP30405 207 aaKnown RBP11.52□□□□□ -0.57
HDAC6-224ENST00000481929 MTCP1P56278 107 aa11.52□□□□□ -0.57
HDAC6-224ENST00000481929 SLC16A12Q6ZSM3 486 aa11.52□□□□□ -0.57
HDAC6-224ENST00000481929 HAPLN4Q86UW8 402 aa11.52□□□□□ -0.57
HDAC6-224ENST00000481929 OR13A1Q8NGR1 328 aa11.52□□□□□ -0.57
HDAC6-224ENST00000481929 CNN2Q99439 309 aaKnown RBP11.52□□□□□ -0.57
HDAC6-224ENST00000481929 ALX4Q9H161 411 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-224ENST00000481929 ZNF107Q9UII5 783 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-224ENST00000481929 RYR1P21817 5038 aa11.52□□□□□ -0.57
HDAC6-224ENST00000481929 MEIKINA0A087WXM9 373 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 A0A1W2PPE3 182 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 CCDC182A6NF36 153 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 MAGEB4O15481 346 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-224ENST00000481929 CNTFRP26992 372 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 CD1BP29016 333 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 RAB9AP51151 201 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 CXCR4P61073 352 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 OR2T5Q6IEZ7 315 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 CCDC54Q8NEL0 328 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 OR2T29Q8NH02 315 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 RFESDQ8TAC1 157 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 PP6455Q8WZ26 134 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 FEVQ99581 238 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 ADI1Q9BV57 179 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 LINC00574Q9H8X3 128 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 RETNQ9HD89 108 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 KIF25Q9UIL4 384 aa11.51□□□□□ -0.57
HDAC6-224ENST00000481929 STUB1Q9UNE7 303 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms