RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SRP14P37108 136 aaKnown RBP15.39■□□□□ 0.05
SSU72-203ENST00000378725 GLIPR1P48060 266 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 DLX6P56179 175 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 KRBOX4Q5JUW0 171 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 ATAD3CQ5T2N8 411 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 FAM89BQ8N5H3 189 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 PCGF1Q9BSM1 259 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 LPAR5Q9H1C0 372 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 LINC00312Q9Y6C7 94 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 MTORP42345 2549 aa15.39■□□□□ 0.05
SSU72-203ENST00000378725 TMEM272A0A1B0GTI8 110 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 SMIM30A4D0T7 59 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 C17orf98A8MV24 154 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 HSPB6O14558 160 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 SLC2A2P11168 524 aaPredicted RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 CCL3L1P16619 93 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 PRTN3P24158 256 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 TGFBR1P36897 503 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 RPL5P46777 297 aaKnown RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 LSM3P62310 102 aaKnown RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 MXD1Q05195 221 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 BLMHQ13867 455 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 ATXN7L3Q14CW9 347 aaPredicted RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 RSBN1Q5VWQ0 802 aaPredicted RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 SLC35E4Q6ICL7 350 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 SFXN4Q6P4A7 337 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 BRICD5Q6PL45 260 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 SLC16A12Q6ZSM3 486 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 VMO1Q7Z5L0 202 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 GPR141Q7Z602 305 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 PLPPR1Q8TBJ4 325 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 TNFRSF14Q92956 283 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 URM1Q9BTM9 101 aaKnown RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 METTL8Q9H825 291 aaKnown RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 LIN7BQ9HAP6 207 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 NUP50Q9UKX7 468 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 RAB22AQ9UL26 194 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 UBE2J1Q9Y385 318 aaPredicted RBP15.38■□□□□ 0.05
SSU72-203ENST00000378725 PEX16Q9Y5Y5 336 aa15.38■□□□□ 0.05
SSU72-203ENST00000378725 NSD1Q96L73 2696 aaPredicted RBP15.37■□□□□ 0.05
SSU72-203ENST00000378725 A0A0A6YYD4 124 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 ODAMA1E959 279 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 MCRIP1C9JLW8 97 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 PDCD6O75340 191 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 GABARAPO95166 117 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 RBP4P02753 201 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 ZNF728P0DKX0 622 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 RBM39Q14498 530 aaKnown RBP15.37■□□□□ 0.05
SSU72-203ENST00000378725 RAB12Q6IQ22 244 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 PTX4Q96A99 478 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 NICN1Q9BSH3 213 aa15.37■□□□□ 0.05
SSU72-203ENST00000378725 NAA50Q9GZZ1 169 aaKnown RBP15.37■□□□□ 0.05
SSU72-203ENST00000378725 SVEP1Q4LDE5 3571 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 A0A0B4J203 849 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 CENPVL3A0A0U1RRI6 287 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 FOXI3A8MTJ6 420 aaPredicted RBP15.36■□□□□ 0.05
SSU72-203ENST00000378725 TMEM127O75204 238 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 IL1AP01583 271 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 CGB3P0DN86 165 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 CGB7P0DN87 165 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 IGHV4-38-2P0DP08 117 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 RAB6AP20340 208 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 CHATP28329 748 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 RPS19P39019 145 aaKnown RBP15.36■□□□□ 0.05
SSU72-203ENST00000378725 BPIFB3P59826 476 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 PLA2G7Q13093 441 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 CTF1Q16619 201 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 GPR107Q5VW38 600 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 ZNF714Q96N38 554 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 TAS2R3Q9NYW6 316 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 OR6C3Q9NZP0 311 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 DAPK2Q9UIK4 370 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 KIF25Q9UIL4 384 aa15.36■□□□□ 0.05
SSU72-203ENST00000378725 TRGV10A0A0A0MS01 117 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 hCG_1809904A0A1W2PP81 198 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 A0A1W2PPE2 198 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 A0A1W2PR64 198 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 A0A1W2PRV1 198 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 ERVFRD-1P60508 538 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 NCS1P62166 190 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 TUSC1Q2TAM9 212 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 ZNF497Q6ZNH5 498 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 CROCCP3Q8IVE0 287 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 GAPTQ8N292 157 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 ZNF565Q8N9K5 539 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 LHX4Q969G2 390 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 NEDD4LQ96PU5 975 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 SIRT7Q9NRC8 400 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 ING3Q9NXR8 418 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 SCOCQ9UIL1 159 aa15.35■□□□□ 0.05
SSU72-203ENST00000378725 SONP18583 2426 aaKnown RBP15.34■□□□□ 0.05
SSU72-203ENST00000378725 MEIKINA0A087WXM9 373 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 TRAV40A0A0B4J280 105 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 MEX3AA1L020 520 aaKnown RBP15.34■□□□□ 0.05
SSU72-203ENST00000378725 SOCS1O15524 211 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 CA11O75493 328 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 MT-ND4P03905 459 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 EPHA1P21709 976 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 BLVRBP30043 206 aaPredicted RBP15.34■□□□□ 0.05
SSU72-203ENST00000378725 EFNB2P52799 333 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms