RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF737O75373 536 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 CTXN2P0C2S0 81 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 OR5G3P0C626 314 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 OR5AC1P0C628 307 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 TGIF1Q15583 401 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 UNQ9370/PRO34162Q6UXP9 181 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 TGIF2LXQ8IUE1 241 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 TAAR9Q96RI9 348 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 BOKQ9UMX3 212 aaPredicted RBP11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 TRBV5-5A0A0J9YX44 114 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 ARG2P78540 354 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 SOSTQ9BQB4 213 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 RTN4RQ9BZR6 473 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 GSN-AS1Q9NRJ2 163 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 DOK5Q9P104 306 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 C5orf49A4QMS7 147 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 TERTO14746 1132 aaKnown RBP11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 CLN3Q13286 438 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 HFEQ30201 348 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 FLVCR1-AS1Q8TAF5 88 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 NMES1Q9C002 83 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 TNFSF18Q9UNG2 199 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 HDGFL3Q9Y3E1 203 aa11.04□□□□□ -0.64
SLC6A1-201ENST00000287766 ADAM20O43506 726 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 LYPD3O95274 346 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 CCL4P13236 92 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 CLDN15P56746 228 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 MICBQ29980 383 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 RHBDD2Q6NTF9 364 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 CIB3Q96Q77 187 aaPredicted RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 PRSS50Q9UI38 385 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 KCNK7Q9Y2U2 307 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 ENSAO43768 121 aaKnown RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 VAMP5O95183 116 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 DHRS7BQ6IAN0 325 aaPredicted RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 DEGS2Q6QHC5 323 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 DPF1Q92782 380 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 CORO2AQ92828 525 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 SCGB2A1O75556 95 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 EXT1Q16394 746 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 KMT5CQ86Y97 462 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 D2HGDHQ8N465 521 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 HDHD3Q9BSH5 251 aaPredicted RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 HEATR5AQ86XA9 2040 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 POLEQ07864 2286 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 RALGAPA1Q6GYQ0 2036 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 DUXBA0A1W2PPF3 345 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 SPINT2O43291 252 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 CAMPP49913 170 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 SUMO3P55854 103 aaPredicted RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 NHLRC3Q5JS37 347 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 GPX7Q96SL4 187 aaPredicted RBP11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 TMED3Q9Y3Q3 217 aa11.03□□□□□ -0.64
SLC6A1-201ENST00000287766 K7ERU9 68 aa11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 CIDEAO60543 219 aa11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 SPATA46Q5T0L3 261 aa11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 PLPPR2Q96GM1 343 aa11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 ESRP2Q9H6T0 727 aaKnown RBP11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 DUSP13Q9UII6 198 aa11.02□□□□□ -0.64
SLC6A1-201ENST00000287766 IGLV1-36A0A0B4J1U3 117 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 TSPAN2O60636 221 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 DXOO77932 396 aaKnown RBP11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CT45A6P0DMU7 189 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CT45A5P0DMU8 189 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CT45A7P0DMV0 189 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 GALNSP34059 522 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 TCL1AP56279 114 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 ARL16Q0P5N6 197 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 PNRC1Q12796 327 aaPredicted RBP11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 COL5A1-AS1Q5SY13 56 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CADM4Q8NFZ8 388 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 UTP23Q9BRU9 249 aaKnown RBP11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 CBLN4Q9NTU7 201 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 OR2M5A3KFT3 312 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 ZNF32P17041 273 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 PNLIPRP3Q17RR3 467 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 RNF133Q8WVZ7 376 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 Q9N2K0 584 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 RAB9BQ9NP90 201 aa11.02□□□□□ -0.65
SLC6A1-201ENST00000287766 NPIPB9F8W1W9 429 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 SIRPB1O00241 398 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 SCAND1P57086 179 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 NTNG2Q96CW9 530 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 ATG101Q9BSB4 218 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 GGACTQ9BVM4 153 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 SRD5A3Q9H8P0 318 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 R4GN57 208 aa11.01□□□□□ -0.65
SLC6A1-201ENST00000287766 PHF3Q92576 2039 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms