RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr1020Q8VFK7 317 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ier5lQ99J55 406 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Jmjd6Q9ERI5 403 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Chrnb2Q9ERK7 501 aa10.81□□□□□ -0.68
Trim56-201ENSMUST00000054384 Trbv2A0A0B4J1G8 114 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm9972E9Q053 102 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp386Q1WWJ5 626 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr453Q7TRV7 317 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 HraslsQ9QZU4 167 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Wdr25E9Q349 535 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 IghgP01863 330 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Defa-rs1P17533 116 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Peli1Q8C669 418 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Sirt4Q8R216 333 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Spns2Q91VM4 549 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 C1qtnf3Q9ES30 246 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nkain4Q9JMG4 208 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Lrit3W8DXL4 681 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1289A0A288CFY5 326 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Samt1A2BED8 237 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr547E9PXN3 311 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Fbxw25F7C9P2 466 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Vmn1r34G3XA52 309 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 H1f0P10922 194 aaKnown RBP10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Rpl29P47915 160 aaKnown RBP10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Evx2P49749 475 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 F7P70375 446 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Pax5Q02650 391 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 MamstrQ0ZCJ7 421 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 PigtQ8BXQ2 582 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Qrsl1Q9CZN8 525 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Bex2Q9WTZ8 129 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1098A2AVB0 315 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cldn1O88551 211 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gabrg2P22723 474 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Bmpr1bP36898 502 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 S1pr2P52592 352 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 B4galnt1Q09200 533 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 PilrbQ2YFS2 224 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 BC147527Q3V185 167 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp975Q6NVD6 525 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem127Q8BGP5 238 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 B3gnt8Q8R3I9 389 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp958Q99LG7 467 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mrps30Q9D0G0 442 aaKnown RBP10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 PrknQ9WVS6 464 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Sbf2E9PXF8 1872 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ighv9-4A0A0A6YWH6 117 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Mettl23A2AA28 253 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Zfp456B2RUK9 458 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm21820J3KMU2 361 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ccl5P30882 91 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ykt6Q9CQW1 198 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gstz1Q9WVL0 216 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tex45G3XA23 500 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Onecut1O08755 465 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr145Q60882 310 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Arrb2Q91YI4 410 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Riox1Q9JJF3 603 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Adam23Q9R1V7 829 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dnajc13D4AFX7 2248 aaKnown RBP10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Lrp3E9Q1T6 790 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm20503G3UZK1 150 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 St8sia5P70126 412 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Cks1brtQ3UNC9 96 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Pom121Q8K3Z9 1200 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ms4a6cQ99N08 217 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr661Q99NH4 319 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tmem174Q9DCX7 243 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Loxhd1C8YR32 2068 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Slc19a1P41438 512 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ier3P46694 153 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Csf2raQ00941 388 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 MpgQ04841 333 aaKnown RBP10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Spem1Q5F289 310 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Agpat2Q8K3K7 278 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ndfip1Q8R0W6 221 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Timd2Q8R183 305 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr1155Q8VFR3 314 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Tnfsf13Q9D777 241 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Dapp1Q9QXT1 280 aa10.8□□□□□ -0.68
Trim56-201ENSMUST00000054384 Adamtsl1Q8BLI0 1745 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Trbc2A0A075B5J4 173 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Trbc1A0A0A6YWV4 173 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm20834J3QM72 227 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nudt10P0C027 164 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Nudt11P0C028 164 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Phxr2P15972 65 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 AmbpQ07456 349 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr988Q7TRA1 309 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ntng1Q8R4G0 539 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr50Q8VGK5 312 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Chrdl1Q920C1 447 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gar1Q9CY66 231 aaKnown RBP10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Prss23Q9D6X6 382 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Adam26aQ9R158 697 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Ighv1-24A0A0A6YY24 117 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Olfr789A0A1L1SV77 312 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Gm15140A2BEE3 237 aa10.79□□□□□ -0.68
Trim56-201ENSMUST00000054384 Alx4O35137 399 aa10.79□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms