RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A SLG1P54867 378 aa16.51■□□□□ 0.23
TRN1tP(UGG)A PGS1P25578 521 aa16.5■□□□□ 0.23
TRN1tP(UGG)A DBF4P32325 704 aa16.5■□□□□ 0.23
TRN1tP(UGG)A SEG2P34250 1132 aa16.5■□□□□ 0.23
TRN1tP(UGG)A RRT2P38332 387 aa16.5■□□□□ 0.23
TRN1tP(UGG)A SNZ3P43545 298 aa16.5■□□□□ 0.23
TRN1tP(UGG)A SNZ2P53824 298 aa16.5■□□□□ 0.23
TRN1tP(UGG)A YMR114CQ04471 368 aaKnown RBP16.5■□□□□ 0.23
TRN1tP(UGG)A ERV41Q04651 352 aa16.5■□□□□ 0.23
TRN1tP(UGG)A YLR257WQ06146 321 aaKnown RBP16.5■□□□□ 0.23
TRN1tP(UGG)A DDC1Q08949 612 aa16.5■□□□□ 0.23
TRN1tP(UGG)A YPR117WQ06116 2489 aa16.5■□□□□ 0.23
TRN1tP(UGG)A GFA1P14742 717 aaKnown RBP16.49■□□□□ 0.23
TRN1tP(UGG)A SEC1P30619 724 aaKnown RBP16.49■□□□□ 0.23
TRN1tP(UGG)A SIF2P38262 535 aa16.49■□□□□ 0.23
TRN1tP(UGG)A RAD55P38953 406 aa16.49■□□□□ 0.23
TRN1tP(UGG)A NDC80P40460 691 aa16.49■□□□□ 0.23
TRN1tP(UGG)A YNL034WP53963 612 aa16.49■□□□□ 0.23
TRN1tP(UGG)A YNL018CP53976 612 aa16.49■□□□□ 0.23
TRN1tP(UGG)A YDR278CQ05612 105 aa16.49■□□□□ 0.23
TRN1tP(UGG)A NBP2Q12163 236 aa16.49■□□□□ 0.23
TRN1tP(UGG)A EST1P17214 699 aaPredicted RBP16.48■□□□□ 0.23
TRN1tP(UGG)A PEP7P32609 515 aa16.48■□□□□ 0.23
TRN1tP(UGG)A ABD1P32783 436 aaPredicted RBP16.48■□□□□ 0.23
TRN1tP(UGG)A RCK2P38623 610 aa16.48■□□□□ 0.23
TRN1tP(UGG)A STB5P38699 743 aa16.48■□□□□ 0.23
TRN1tP(UGG)A TMN3P40071 706 aa16.48■□□□□ 0.23
TRN1tP(UGG)A MAF1P41910 395 aa16.48■□□□□ 0.23
TRN1tP(UGG)A ATG16Q03818 150 aa16.48■□□□□ 0.23
TRN1tP(UGG)A RCL1Q08096 367 aaPredicted RBP16.48■□□□□ 0.23
TRN1tP(UGG)A AIM39Q08223 395 aa16.48■□□□□ 0.23
TRN1tP(UGG)A MET4P32389 672 aa16.47■□□□□ 0.23
TRN1tP(UGG)A SRB2P34162 210 aa16.47■□□□□ 0.23
TRN1tP(UGG)A ASG1P40467 964 aa16.47■□□□□ 0.23
TRN1tP(UGG)A GUF1P46943 645 aa16.47■□□□□ 0.23
TRN1tP(UGG)A PUT4P15380 627 aa16.46■□□□□ 0.23
TRN1tP(UGG)A PEX1P24004 1043 aa16.46■□□□□ 0.23
TRN1tP(UGG)A ADE3P07245 946 aaKnown RBP16.45■□□□□ 0.22
TRN1tP(UGG)A AEP2P22136 580 aa16.45■□□□□ 0.22
TRN1tP(UGG)A YER189WP40104 122 aa16.45■□□□□ 0.22
TRN1tP(UGG)A VPS25P47142 202 aa16.45■□□□□ 0.22
TRN1tP(UGG)A YVH1Q02256 364 aaKnown RBP16.45■□□□□ 0.22
TRN1tP(UGG)A SXM1Q04175 944 aaKnown RBP16.45■□□□□ 0.22
TRN1tP(UGG)A TAF9Q05027 157 aa16.45■□□□□ 0.22
TRN1tP(UGG)A PUF3Q07807 879 aaKnown RBP RIP-Chip data16.45■□□□□ 0.22not detected
TRN1tP(UGG)A SAM3Q08986 587 aa16.45■□□□□ 0.22
TRN1tP(UGG)A YRR1Q12172 810 aa16.45■□□□□ 0.22
TRN1tP(UGG)A YLR462WO13556 202 aa16.44■□□□□ 0.22
TRN1tP(UGG)A PDE1P22434 369 aa16.44■□□□□ 0.22
TRN1tP(UGG)A PAP1P29468 568 aaKnown RBP16.44■□□□□ 0.22
TRN1tP(UGG)A YHL049CP38722 271 aa16.44■□□□□ 0.22
TRN1tP(UGG)A SMF1P38925 575 aa16.44■□□□□ 0.22
TRN1tP(UGG)A LCP5P40079 357 aaPredicted RBP16.44■□□□□ 0.22
TRN1tP(UGG)A CDC1P40986 491 aa16.44■□□□□ 0.22
TRN1tP(UGG)A YFL064CP43540 174 aa16.44■□□□□ 0.22
TRN1tP(UGG)A VTC4P47075 721 aa16.44■□□□□ 0.22
TRN1tP(UGG)A IVY1Q04934 453 aa16.44■□□□□ 0.22
TRN1tP(UGG)A YBL111CQ3E7Y5 667 aa16.44■□□□□ 0.22
TRN1tP(UGG)A CWC22P53333 577 aaKnown RBP16.43■□□□□ 0.22
TRN1tP(UGG)A NOG2P53742 486 aaKnown RBP16.43■□□□□ 0.22
TRN1tP(UGG)A HER2Q03557 464 aa16.43■□□□□ 0.22
TRN1tP(UGG)A UFO1Q04511 668 aa16.43■□□□□ 0.22
TRN1tP(UGG)A SPE1P08432 466 aa16.42■□□□□ 0.22
TRN1tP(UGG)A SYN8P31377 255 aa16.42■□□□□ 0.22
TRN1tP(UGG)A YBL055CP34220 418 aaPredicted RBP16.42■□□□□ 0.22
TRN1tP(UGG)A HSL7P38274 827 aa16.42■□□□□ 0.22
TRN1tP(UGG)A REI1P38344 393 aaPredicted RBP16.42■□□□□ 0.22
TRN1tP(UGG)A AVT2P39981 480 aa16.42■□□□□ 0.22
TRN1tP(UGG)A YPL062WQ02781 134 aa16.42■□□□□ 0.22
TRN1tP(UGG)A HRD3Q05787 833 aa16.42■□□□□ 0.22
TRN1tP(UGG)A PIG1Q06216 648 aa16.42■□□□□ 0.22
TRN1tP(UGG)A THI20Q08224 551 aa16.42■□□□□ 0.22
TRN1tP(UGG)A APC5Q08683 685 aa16.42■□□□□ 0.22
TRN1tP(UGG)A VPS5Q92331 675 aa16.42■□□□□ 0.22
TRN1tP(UGG)A TRX1P22217 103 aaKnown RBP16.41■□□□□ 0.22
TRN1tP(UGG)A PMC1P38929 1173 aaPredicted RBP16.41■□□□□ 0.22
TRN1tP(UGG)A KHA1P40309 873 aa16.41■□□□□ 0.22
TRN1tP(UGG)A MTD1Q02046 320 aaKnown RBP16.41■□□□□ 0.22
TRN1tP(UGG)A ELP3Q02908 557 aaKnown RBP16.41■□□□□ 0.22
TRN1tP(UGG)A POB3Q04636 552 aaKnown RBP16.41■□□□□ 0.22
TRN1tP(UGG)A SPO21Q12411 609 aa16.41■□□□□ 0.22
TRN1tP(UGG)A CDC27P38042 758 aa16.4■□□□□ 0.22
TRN1tP(UGG)A FHL1P39521 936 aa16.4■□□□□ 0.22
TRN1tP(UGG)A YIL054WP40524 105 aa16.4■□□□□ 0.22
TRN1tP(UGG)A BFA1P47113 574 aa16.4■□□□□ 0.22
TRN1tP(UGG)A DSS4P32601 143 aa16.39■□□□□ 0.21
TRN1tP(UGG)A SWC5P38326 303 aa16.39■□□□□ 0.21
TRN1tP(UGG)A VPS60Q03390 229 aa16.39■□□□□ 0.21
TRN1tP(UGG)A ZRT2Q12436 422 aa16.39■□□□□ 0.21
TRN1tP(UGG)A YKR051WP36142 418 aa16.38■□□□□ 0.21
TRN1tP(UGG)A YBR053CP38235 358 aa16.38■□□□□ 0.21
TRN1tP(UGG)A LYS9P38999 446 aa16.38■□□□□ 0.21
TRN1tP(UGG)A SAP185P40856 1058 aa16.38■□□□□ 0.21
TRN1tP(UGG)A YGR283CP53336 341 aaPredicted RBP16.38■□□□□ 0.21
TRN1tP(UGG)A CEG1Q01159 459 aaPredicted RBP16.38■□□□□ 0.21
TRN1tP(UGG)A GCN5Q03330 439 aa16.38■□□□□ 0.21
TRN1tP(UGG)A RKM2Q03942 479 aa16.38■□□□□ 0.21
TRN1tP(UGG)A ECM22Q05958 814 aaPredicted RBP16.38■□□□□ 0.21
TRN1tP(UGG)A RGR1P19263 1082 aa16.37■□□□□ 0.21
TRN1tP(UGG)A DPB3P27344 201 aa16.37■□□□□ 0.21
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms