RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SDT1P53078 280 aa-0.9□□□□□ -2.55
snR40snR40 YLR152CP54072 576 aa-0.9□□□□□ -2.55
snR40snR40 GPR1Q12361 961 aa-0.9□□□□□ -2.55
snR40snR40 SEC3P33332 1336 aaKnown RBP-0.9□□□□□ -2.55
snR40snR40 CTT1P06115 562 aa-0.91□□□□□ -2.56
snR40snR40 PHO8P11491 566 aa-0.91□□□□□ -2.56
snR40snR40 HUL4P40985 892 aa-0.91□□□□□ -2.56
snR40snR40 TAM41P53230 385 aa-0.91□□□□□ -2.56
snR40snR40 DIA1P54005 336 aa-0.91□□□□□ -2.56
snR40snR40 YPL071CQ02864 156 aa-0.91□□□□□ -2.56
snR40snR40 TOS4Q06266 489 aa-0.91□□□□□ -2.56
snR40snR40 DIN7Q12086 430 aa-0.91□□□□□ -2.56
snR40snR40 TAH18Q12181 623 aa-0.91□□□□□ -2.56
snR40snR40 GAL4P04386 881 aa-0.92□□□□□ -2.56
snR40snR40 SFP1P32432 683 aa-0.92□□□□□ -2.56
snR40snR40 GSH1P32477 678 aa-0.92□□□□□ -2.56
snR40snR40 RIM4P38741 713 aa-0.92□□□□□ -2.56
snR40snR40 CEP3P40969 608 aa-0.92□□□□□ -2.56
snR40snR40 SSY5P47002 699 aa-0.92□□□□□ -2.56
snR40snR40 SNF12P53628 566 aa-0.92□□□□□ -2.56
snR40snR40 ERG20P08524 352 aaKnown RBP-0.93□□□□□ -2.56
snR40snR40 RAD18P10862 487 aa-0.93□□□□□ -2.56
snR40snR40 ATG1P53104 897 aa-0.93□□□□□ -2.56
snR40snR40 DIP5P53388 608 aa-0.93□□□□□ -2.56
snR40snR40 NAN1Q02931 896 aaKnown RBP-0.93□□□□□ -2.56
snR40snR40 UFO1Q04511 668 aa-0.93□□□□□ -2.56
snR40snR40 YSH1Q06224 779 aaPredicted RBP-0.93□□□□□ -2.56
snR40snR40 YPL066WQ12194 479 aa-0.93□□□□□ -2.56
snR40snR40 ZPS1Q12512 249 aa-0.93□□□□□ -2.56
snR40snR40 HRP1Q99383 534 aaKnown RBP-0.93□□□□□ -2.56
snR40snR40 CPA2P03965 1118 aaKnown RBP-0.94□□□□□ -2.56
snR40snR40 PDA1P16387 420 aaKnown RBP-0.94□□□□□ -2.56
snR40snR40 RER2P35196 286 aa-0.94□□□□□ -2.56
snR40snR40 CTP1P38152 299 aa-0.94□□□□□ -2.56
snR40snR40 SAE2P46946 345 aa-0.94□□□□□ -2.56
snR40snR40 SRP1Q02821 542 aaKnown RBP-0.94□□□□□ -2.56
snR40snR40 HAL9Q12180 1030 aa-0.94□□□□□ -2.56
snR40snR40 PRP28P23394 588 aa-0.95□□□□□ -2.56
snR40snR40 ERG6P25087 383 aaKnown RBP-0.95□□□□□ -2.56
snR40snR40 URA1P28272 314 aaPredicted RBP-0.95□□□□□ -2.56
snR40snR40 SRP40P32583 406 aaPredicted RBP-0.95□□□□□ -2.56
snR40snR40 YHR112CP38716 378 aa-0.95□□□□□ -2.56
snR40snR40 GSH2Q08220 491 aa-0.95□□□□□ -2.56
snR40snR40 YOR131CQ12486 218 aa-0.95□□□□□ -2.56
snR40snR40 RFA1P22336 621 aaKnown RBP-0.96□□□□□ -2.56
snR40snR40 SGF29P25554 259 aa-0.96□□□□□ -2.56
snR40snR40 VPS35P34110 944 aa-0.96□□□□□ -2.56
snR40snR40 TRZ1P36159 838 aaPredicted RBP-0.96□□□□□ -2.56
snR40snR40 FAA3P39002 694 aa-0.96□□□□□ -2.56
snR40snR40 PCL6P40038 420 aa-0.96□□□□□ -2.56
snR40snR40 GET2P40056 285 aa-0.96□□□□□ -2.56
snR40snR40 KHA1P40309 873 aa-0.96□□□□□ -2.56
snR40snR40 IRC15Q02733 499 aa-0.96□□□□□ -2.56
snR40snR40 MRL1Q06815 381 aa-0.96□□□□□ -2.56
snR40snR40 DAP1Q12091 152 aa-0.96□□□□□ -2.56
snR40snR40 BCS1P32839 456 aa-0.97□□□□□ -2.56
snR40snR40 KES1P35844 434 aaKnown RBP-0.97□□□□□ -2.56
snR40snR40 MID2P36027 376 aa-0.97□□□□□ -2.56
snR40snR40 QRI7P43122 407 aa-0.97□□□□□ -2.56
snR40snR40 YFL015CP43578 164 aa-0.97□□□□□ -2.56
snR40snR40 MPS3P47069 682 aa-0.97□□□□□ -2.56
snR40snR40 YPT11P48559 417 aa-0.97□□□□□ -2.56
snR40snR40 YNL018CP53976 612 aa-0.97□□□□□ -2.56
snR40snR40 LEE1Q02799 301 aaKnown RBP-0.97□□□□□ -2.56
snR40snR40 APL5Q08951 932 aaKnown RBP-0.97□□□□□ -2.56
snR40snR40 CHS5Q12114 671 aaKnown RBP-0.97□□□□□ -2.56
snR40snR40 RPS9AO13516 197 aaKnown RBP-0.98□□□□□ -2.57
snR40snR40 HXK1P04806 485 aaKnown RBP-0.98□□□□□ -2.57
snR40snR40 SAG1P20840 650 aa-0.98□□□□□ -2.57
snR40snR40 PEX1P24004 1043 aa-0.98□□□□□ -2.57
snR40snR40 NPP1P25353 742 aa-0.98□□□□□ -2.57
snR40snR40 VBA3P25594 458 aa-0.98□□□□□ -2.57
snR40snR40 APL2P36000 726 aaPredicted RBP-0.98□□□□□ -2.57
snR40snR40 VBA5P36172 582 aa-0.98□□□□□ -2.57
snR40snR40 MRP21P38175 177 aa-0.98□□□□□ -2.57
snR40snR40 BIT2P38346 545 aa-0.98□□□□□ -2.57
snR40snR40 EFM2P38347 419 aa-0.98□□□□□ -2.57
snR40snR40 YIL092WP40497 633 aa-0.98□□□□□ -2.57
snR40snR40 TDA10P42938 290 aa-0.98□□□□□ -2.57
snR40snR40 YPR091CQ06833 770 aa-0.98□□□□□ -2.57
snR40snR40 PRM7Q12459 698 aa-0.98□□□□□ -2.57
snR40snR40 ARP6Q12509 438 aa-0.98□□□□□ -2.57
snR40snR40 GCD6P32501 712 aaKnown RBP-0.99□□□□□ -2.57
snR40snR40 YGP1P38616 354 aaKnown RBP-0.99□□□□□ -2.57
snR40snR40 PIG2P40187 538 aa-0.99□□□□□ -2.57
snR40snR40 ASG1P40467 964 aa-0.99□□□□□ -2.57
snR40snR40 PRP31P49704 494 aaPredicted RBP-0.99□□□□□ -2.57
snR40snR40 COQ6P53318 479 aa-0.99□□□□□ -2.57
snR40snR40 DAK1P54838 584 aaKnown RBP-0.99□□□□□ -2.57
snR40snR40 OYE2Q03558 400 aaKnown RBP-0.99□□□□□ -2.57
snR40snR40 TRS23Q03784 219 aa-0.99□□□□□ -2.57
snR40snR40 ECM7Q06200 448 aa-0.99□□□□□ -2.57
snR40snR40 RSC3Q06639 885 aa-0.99□□□□□ -2.57
snR40snR40 IES4Q08561 116 aa-0.99□□□□□ -2.57
snR40snR40 TRE2Q08693 809 aa-0.99□□□□□ -2.57
snR40snR40 RKM4Q12504 494 aa-0.99□□□□□ -2.57
snR40snR40 YBL111CQ3E7Y5 667 aa-0.99□□□□□ -2.57
snR40snR40 CET1O13297 549 aaPredicted RBP-1□□□□□ -2.57
snR40snR40 PRB1P09232 635 aa-1□□□□□ -2.57
snR40snR40 ADE2P21264 571 aaKnown RBP-1□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 86.6 ms