RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W HOL1P53389 586 aa4.55□□□□□ -1.68
HSH49YOR319W ARP4P80428 489 aa4.55□□□□□ -1.68
HSH49YOR319W GPD1Q00055 391 aaKnown RBP4.55□□□□□ -1.68
HSH49YOR319W ECM38Q05902 660 aaPredicted RBP4.55□□□□□ -1.68
HSH49YOR319W HBT1Q07653 1046 aaKnown RBP4.55□□□□□ -1.68
HSH49YOR319W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
HSH49YOR319W PHO81P17442 1178 aa4.54□□□□□ -1.68
HSH49YOR319W PPS1P38148 807 aa4.54□□□□□ -1.68
HSH49YOR319W FAT1P38225 669 aa4.54□□□□□ -1.68
HSH49YOR319W YHL041WP38730 149 aa4.54□□□□□ -1.68
HSH49YOR319W MIP6P38760 659 aaKnown RBP4.54□□□□□ -1.68
HSH49YOR319W BEM4P39011 633 aa4.54□□□□□ -1.68
HSH49YOR319W HIS6P40545 261 aa4.54□□□□□ -1.68
HSH49YOR319W SAP185P40856 1058 aa4.54□□□□□ -1.68
HSH49YOR319W SVL3Q03088 825 aaKnown RBP4.54□□□□□ -1.68
HSH49YOR319W YHL017WP38745 532 aa4.53□□□□□ -1.68
HSH49YOR319W YIR042CP40586 236 aa4.53□□□□□ -1.68
HSH49YOR319W MTR3P48240 250 aaPredicted RBP4.53□□□□□ -1.68
HSH49YOR319W BRE5P53741 515 aaKnown RBP4.53□□□□□ -1.68
HSH49YOR319W LGE1Q02796 332 aaKnown RBP4.53□□□□□ -1.68
HSH49YOR319W MSS18P08593 268 aa4.52□□□□□ -1.69
HSH49YOR319W YBR053CP38235 358 aa4.52□□□□□ -1.69
HSH49YOR319W QRI7P43122 407 aa4.52□□□□□ -1.69
HSH49YOR319W YJL163CP46996 555 aa4.52□□□□□ -1.69
HSH49YOR319W ENP2P48234 707 aaKnown RBP4.52□□□□□ -1.69
HSH49YOR319W ORC4P54791 529 aa4.52□□□□□ -1.69
HSH49YOR319W IRC10Q08118 586 aa4.52□□□□□ -1.69
HSH49YOR319W HOP1P20050 605 aa4.51□□□□□ -1.69
HSH49YOR319W SSH4P32343 579 aa4.51□□□□□ -1.69
HSH49YOR319W MTH1P35198 433 aa4.51□□□□□ -1.69
HSH49YOR319W CUE2P36075 443 aaKnown RBP4.51□□□□□ -1.69
HSH49YOR319W AKL1P38080 1108 aaKnown RBP4.51□□□□□ -1.69
HSH49YOR319W SRP68P38687 599 aaKnown RBP4.51□□□□□ -1.69
HSH49YOR319W SAW1P39735 261 aa4.51□□□□□ -1.69
HSH49YOR319W ACA1P39970 489 aa4.51□□□□□ -1.69
HSH49YOR319W VID28P40547 921 aa4.51□□□□□ -1.69
HSH49YOR319W GND2P53319 492 aa4.51□□□□□ -1.69
HSH49YOR319W NOP15P53927 220 aaPredicted RBP4.51□□□□□ -1.69
HSH49YOR319W YLR407WQ06070 228 aa4.51□□□□□ -1.69
HSH49YOR319W PSF3Q12146 194 aa4.51□□□□□ -1.69
HSH49YOR319W YOL114CQ12322 202 aa4.51□□□□□ -1.69
HSH49YOR319W GPR1Q12361 961 aa4.51□□□□□ -1.69
HSH49YOR319W RPS17AP02407 136 aaKnown RBP4.5□□□□□ -1.69
HSH49YOR319W LAT1P12695 482 aaKnown RBP4.5□□□□□ -1.69
HSH49YOR319W GLN4P13188 809 aaKnown RBP4.5□□□□□ -1.69
HSH49YOR319W RPS17BP14127 136 aaKnown RBP4.5□□□□□ -1.69
HSH49YOR319W ATP12P22135 325 aa4.5□□□□□ -1.69
HSH49YOR319W PHO3P24031 467 aa4.5□□□□□ -1.69
HSH49YOR319W PET309P32522 965 aaPredicted RBP4.5□□□□□ -1.69
HSH49YOR319W APN2P38207 520 aa4.5□□□□□ -1.69
HSH49YOR319W EXO84P38261 753 aa4.5□□□□□ -1.69
HSH49YOR319W YBR259WP38338 688 aa4.5□□□□□ -1.69
HSH49YOR319W SIC1P38634 284 aa4.5□□□□□ -1.69
HSH49YOR319W SET2P46995 733 aaKnown RBP4.5□□□□□ -1.69
HSH49YOR319W ASK10P48361 1146 aa4.5□□□□□ -1.69
HSH49YOR319W YMR210WQ03649 449 aa4.5□□□□□ -1.69
HSH49YOR319W HLR1Q04429 423 aa4.5□□□□□ -1.69
HSH49YOR319W BRE1Q07457 700 aaKnown RBP4.5□□□□□ -1.69
HSH49YOR319W TGL5Q12043 749 aa4.5□□□□□ -1.69
HSH49YOR319W CDC26P14724 124 aa4.49□□□□□ -1.69
HSH49YOR319W APA1P16550 321 aaKnown RBP4.49□□□□□ -1.69
HSH49YOR319W ACO1P19414 778 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
HSH49YOR319W DBF20P32328 564 aa4.49□□□□□ -1.69
HSH49YOR319W HXT4P32467 576 aa4.49□□□□□ -1.69
HSH49YOR319W SDS22P36047 338 aa4.49□□□□□ -1.69
HSH49YOR319W YHR202WP38887 602 aa4.49□□□□□ -1.69
HSH49YOR319W GID8P40208 455 aa4.49□□□□□ -1.69
HSH49YOR319W SDS3P40505 327 aa4.49□□□□□ -1.69
HSH49YOR319W SNM1P40993 198 aa4.49□□□□□ -1.69
HSH49YOR319W IES1P43579 692 aa4.49□□□□□ -1.69
HSH49YOR319W YBP2P53169 641 aa4.49□□□□□ -1.69
HSH49YOR319W RIA1P53893 1110 aa4.49□□□□□ -1.69
HSH49YOR319W CEG1Q01159 459 aaPredicted RBP4.49□□□□□ -1.69
HSH49YOR319W MTD1Q02046 320 aaKnown RBP4.49□□□□□ -1.69
HSH49YOR319W IRC13Q08630 104 aa4.49□□□□□ -1.69
HSH49YOR319W NUR1Q12066 484 aa4.49□□□□□ -1.69
HSH49YOR319W ARP7Q12406 477 aa4.49□□□□□ -1.69
HSH49YOR319W MSM1P22438 575 aa4.48□□□□□ -1.69
HSH49YOR319W IMG2P25642 146 aaPredicted RBP4.48□□□□□ -1.69
HSH49YOR319W HIS7P33734 552 aaKnown RBP4.48□□□□□ -1.69
HSH49YOR319W DUN1P39009 513 aa4.48□□□□□ -1.69
HSH49YOR319W ERP2P39704 215 aa4.48□□□□□ -1.69
HSH49YOR319W STL1P39932 569 aa4.48□□□□□ -1.69
HSH49YOR319W VPS27P40343 622 aaKnown RBP4.48□□□□□ -1.69
HSH49YOR319W YIL092WP40497 633 aa4.48□□□□□ -1.69
HSH49YOR319W IRC5P43610 853 aa4.48□□□□□ -1.69
HSH49YOR319W PUS4P48567 403 aaKnown RBP4.48□□□□□ -1.69
HSH49YOR319W TEP1P53916 434 aa4.48□□□□□ -1.69
HSH49YOR319W LEE1Q02799 301 aaKnown RBP4.48□□□□□ -1.69
HSH49YOR319W YML131WQ03102 365 aa4.48□□□□□ -1.69
HSH49YOR319W ASM4Q05166 528 aa4.48□□□□□ -1.69
HSH49YOR319W COG4Q06096 861 aa4.48□□□□□ -1.69
HSH49YOR319W NGL1Q08213 363 aaKnown RBP4.48□□□□□ -1.69
HSH49YOR319W CWC2Q12046 339 aaPredicted RBP4.48□□□□□ -1.69
HSH49YOR319W ATG11Q12527 1178 aa4.48□□□□□ -1.69
HSH49YOR319W MF(ALPHA)2P32435 120 aa4.47□□□□□ -1.69
HSH49YOR319W APT2P36973 181 aa4.47□□□□□ -1.69
HSH49YOR319W PCL5P38794 229 aa4.47□□□□□ -1.69
HSH49YOR319W ECM1P39715 212 aa4.47□□□□□ -1.69
HSH49YOR319W SSP120P39931 234 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms