RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C TRE1Q08919 783 aa7.74□□□□□ -1.17
RUP1YOR138C OSW2Q12202 724 aa7.74□□□□□ -1.17
RUP1YOR138C ILS1P09436 1072 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C MSR1P38714 643 aa7.73□□□□□ -1.17
RUP1YOR138C YHL008CP38750 627 aa7.73□□□□□ -1.17
RUP1YOR138C SAW1P39735 261 aa7.73□□□□□ -1.17
RUP1YOR138C FTR1P40088 404 aa7.73□□□□□ -1.17
RUP1YOR138C ASN1P49089 572 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C ERV41Q04651 352 aa7.73□□□□□ -1.17
RUP1YOR138C ADE13Q05911 482 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C SUB2Q07478 446 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C IES4Q08561 116 aa7.73□□□□□ -1.17
RUP1YOR138C FAP7Q12055 197 aaPredicted RBP7.73□□□□□ -1.17
RUP1YOR138C MRM1P25270 412 aa7.73□□□□□ -1.17
RUP1YOR138C PYC2P32327 1180 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C MCR1P36060 302 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C TDA11P38854 504 aa7.73□□□□□ -1.17
RUP1YOR138C PRY3P47033 881 aa7.73□□□□□ -1.17
RUP1YOR138C ACL4Q03771 387 aa7.73□□□□□ -1.17
RUP1YOR138C BUD22Q04347 519 aaKnown RBP7.73□□□□□ -1.17
RUP1YOR138C CST9Q06032 482 aa7.73□□□□□ -1.17
RUP1YOR138C YET3Q07451 203 aa7.73□□□□□ -1.17
RUP1YOR138C GUD1Q07729 489 aa7.73□□□□□ -1.17
RUP1YOR138C DED1P06634 604 aaKnown RBP7.72□□□□□ -1.17
RUP1YOR138C FBP1P09201 348 aa7.72□□□□□ -1.17
RUP1YOR138C HOP09932 586 aa7.72□□□□□ -1.17
RUP1YOR138C SLY1P22213 666 aa7.72□□□□□ -1.17
RUP1YOR138C TRX1P22217 103 aaKnown RBP7.72□□□□□ -1.17
RUP1YOR138C URA7P28274 579 aaKnown RBP7.72□□□□□ -1.17
RUP1YOR138C MCM5P29496 775 aaKnown RBP7.72□□□□□ -1.17
RUP1YOR138C BCS1P32839 456 aa7.72□□□□□ -1.17
RUP1YOR138C SEC6P32844 805 aa7.72□□□□□ -1.17
RUP1YOR138C ETR1P38071 380 aa7.72□□□□□ -1.17
RUP1YOR138C FLC2P39719 783 aa7.72□□□□□ -1.17
RUP1YOR138C JEM1P40358 645 aa7.72□□□□□ -1.17
RUP1YOR138C SCD6P45978 349 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
RUP1YOR138C GPD1Q00055 391 aaKnown RBP7.72□□□□□ -1.17
RUP1YOR138C ROD1Q02805 837 aa7.72□□□□□ -1.17
RUP1YOR138C ISA1Q07821 250 aaPredicted RBP7.72□□□□□ -1.17
RUP1YOR138C TY1B-AO13527 1196 aaKnown RBP7.71□□□□□ -1.17
RUP1YOR138C TIF1P10081 395 aaKnown RBP7.71□□□□□ -1.17
RUP1YOR138C YER152CP10356 443 aa7.71□□□□□ -1.17
RUP1YOR138C TMT1P32643 299 aa7.71□□□□□ -1.17
RUP1YOR138C SET3P36124 751 aa7.71□□□□□ -1.17
RUP1YOR138C TRM5P38793 499 aa7.71□□□□□ -1.17
RUP1YOR138C QNS1P38795 714 aaKnown RBP7.71□□□□□ -1.17
RUP1YOR138C EAF5P39995 279 aa7.71□□□□□ -1.17
RUP1YOR138C HLJ1P48353 224 aa7.71□□□□□ -1.17
RUP1YOR138C ARI1P53111 347 aaKnown RBP7.71□□□□□ -1.17
RUP1YOR138C TEP1P53916 434 aa7.71□□□□□ -1.17
RUP1YOR138C DAK1P54838 584 aaKnown RBP7.71□□□□□ -1.17
RUP1YOR138C OSH6Q02201 448 aa7.71□□□□□ -1.17
RUP1YOR138C MSH6Q03834 1242 aa7.71□□□□□ -1.17
RUP1YOR138C ADY3Q07732 790 aa7.71□□□□□ -1.17
RUP1YOR138C DIA2Q08496 732 aaPredicted RBP7.71□□□□□ -1.17
RUP1YOR138C AIM7Q12156 149 aa7.71□□□□□ -1.17
RUP1YOR138C TEF1P02994 458 aaKnown RBP7.71□□□□□ -1.18
RUP1YOR138C YSC84P32793 468 aa7.71□□□□□ -1.18
RUP1YOR138C YJL206CP39529 758 aa7.71□□□□□ -1.18
RUP1YOR138C SAE2P46946 345 aa7.71□□□□□ -1.18
RUP1YOR138C YJL007CP47080 104 aa7.71□□□□□ -1.18
RUP1YOR138C PAN2P53010 1115 aaPredicted RBP7.71□□□□□ -1.18
RUP1YOR138C YGR125WP53273 1036 aa7.71□□□□□ -1.18
RUP1YOR138C YNL146WP53906 100 aa7.71□□□□□ -1.18
RUP1YOR138C ADI1Q03677 179 aa7.71□□□□□ -1.18
RUP1YOR138C SND1Q04007 877 aa7.71□□□□□ -1.18
RUP1YOR138C YSH1Q06224 779 aaPredicted RBP7.71□□□□□ -1.18
RUP1YOR138C UBX5Q06682 500 aa7.71□□□□□ -1.18
RUP1YOR138C SHS1Q07657 551 aa7.71□□□□□ -1.18
RUP1YOR138C GPI13Q07830 1017 aa7.71□□□□□ -1.18
RUP1YOR138C SPE4Q12455 300 aa7.71□□□□□ -1.18
RUP1YOR138C ENO2P00925 437 aaKnown RBP7.7□□□□□ -1.18
RUP1YOR138C NAT1P12945 854 aaKnown RBP7.7□□□□□ -1.18
RUP1YOR138C EXO70P19658 623 aa7.7□□□□□ -1.18
RUP1YOR138C HES1P35843 434 aa7.7□□□□□ -1.18
RUP1YOR138C UBP14P38237 781 aaKnown RBP7.7□□□□□ -1.18
RUP1YOR138C PCM1P38628 557 aaKnown RBP7.7□□□□□ -1.18
RUP1YOR138C ARG2P40360 574 aa7.7□□□□□ -1.18
RUP1YOR138C TMA108P40462 946 aa7.7□□□□□ -1.18
RUP1YOR138C YJL045WP47052 634 aa7.7□□□□□ -1.18
RUP1YOR138C YGR016WP53209 190 aa7.7□□□□□ -1.18
RUP1YOR138C YDR476CQ03362 224 aa7.7□□□□□ -1.18
RUP1YOR138C FMN1Q03778 218 aa7.7□□□□□ -1.18
RUP1YOR138C THI7Q05998 598 aa7.7□□□□□ -1.18
RUP1YOR138C COX11P19516 300 aaKnown RBP7.69□□□□□ -1.18
RUP1YOR138C MRPL32P25348 183 aa7.69□□□□□ -1.18
RUP1YOR138C MEI4P29467 408 aa7.69□□□□□ -1.18
RUP1YOR138C DGR2P32330 852 aa7.69□□□□□ -1.18
RUP1YOR138C IRE1P32361 1115 aa7.69□□□□□ -1.18
RUP1YOR138C UTR4P32626 227 aa7.69□□□□□ -1.18
RUP1YOR138C NUP120P35729 1037 aa7.69□□□□□ -1.18
RUP1YOR138C REG2P38232 338 aa7.69□□□□□ -1.18
RUP1YOR138C VID24P38263 362 aa7.69□□□□□ -1.18
RUP1YOR138C SCC4P40090 624 aa7.69□□□□□ -1.18
RUP1YOR138C FAR3P46671 204 aa7.69□□□□□ -1.18
RUP1YOR138C CUL3P53202 744 aa7.69□□□□□ -1.18
RUP1YOR138C PEX29Q03370 554 aa7.69□□□□□ -1.18
RUP1YOR138C COQ9Q05779 260 aa7.69□□□□□ -1.18
RUP1YOR138C KAP95Q06142 861 aaKnown RBP7.69□□□□□ -1.18
RUP1YOR138C EMP46Q12396 444 aa7.69□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms