RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	ATH1	P48016	1211 aa		11.26	□□□□□ -0.61
YSP3	YOR003W	UTP8	P53276	713 aa	Known RBP	11.26	□□□□□ -0.61
YSP3	YOR003W	DIS3	Q08162	1001 aa	Known RBP	11.26	□□□□□ -0.61
YSP3	YOR003W	NBP2	Q12163	236 aa		11.26	□□□□□ -0.61
YSP3	YOR003W	MET4	P32389	672 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	ABZ1	P37254	787 aa	Predicted RBP	11.25	□□□□□ -0.61
YSP3	YOR003W	RIM4	P38741	713 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	OSW7	P43611	510 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	STU2	P46675	888 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	GUF1	P46943	645 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	ERG5	P54781	538 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	YDR222W	Q04925	415 aa		11.25	□□□□□ -0.61
YSP3	YOR003W	MRP4	P32902	394 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	YKR051W	P36142	418 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	PCH2	P38126	564 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	AVT2	P39981	480 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	VTC4	P47075	721 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	PUS2	P53167	370 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	CEG1	Q01159	459 aa	Predicted RBP	11.24	□□□□□ -0.61
YSP3	YOR003W	MTD1	Q02046	320 aa	Known RBP	11.24	□□□□□ -0.61
YSP3	YOR003W	GYL1	Q04322	720 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	OPY2	Q06810	360 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	NEW1	Q08972	1196 aa	Known RBP	11.24	□□□□□ -0.61
YSP3	YOR003W	NDJ1	Q12366	352 aa		11.24	□□□□□ -0.61
YSP3	YOR003W	BI2	P03873	423 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	BI4	P03879	638 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	MTF2	P10849	440 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	RAD16	P31244	790 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	TSA1	P34760	196 aa	Known RBP	11.23	□□□□□ -0.61
YSP3	YOR003W	SFB3	P38810	929 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	FHL1	P39521	936 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	HOP2	P53187	214 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	11.23	□□□□□ -0.61	not detected
YSP3	YOR003W	PML39	Q03760	334 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	ECM22	Q05958	814 aa	Predicted RBP	11.23	□□□□□ -0.61
YSP3	YOR003W	YPQ1	Q12010	308 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	BI3	Q9ZZW7	517 aa		11.23	□□□□□ -0.61
YSP3	YOR003W	BET2	P20133	325 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	RAM1	P22007	431 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	DAL1	P32375	460 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	COY1	P34237	679 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	YBR225W	P38321	900 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	SET5	P38890	526 aa	Known RBP	11.22	□□□□□ -0.61
YSP3	YOR003W	REF2	P42073	533 aa	Predicted RBP	11.22	□□□□□ -0.61
YSP3	YOR003W	BFA1	P47113	574 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	HRD3	Q05787	833 aa		11.22	□□□□□ -0.61
YSP3	YOR003W	YKL097C	P34245	136 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	DUG2	P38149	878 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	NCL1	P38205	684 aa	Known RBP	11.21	□□□□□ -0.61
YSP3	YOR003W	TDA3	P38758	523 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	NSE5	Q03718	556 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	UTP5	Q04177	643 aa	Known RBP	11.21	□□□□□ -0.61
YSP3	YOR003W	TAF9	Q05027	157 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	YLR001C	Q07895	862 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	RAD59	Q12223	238 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	CCH1	P50077	2039 aa		11.21	□□□□□ -0.61
YSP3	YOR003W	IMG2	P25642	146 aa	Predicted RBP	11.2	□□□□□ -0.62
YSP3	YOR003W	DSS4	P32601	143 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	MFT1	P33441	392 aa	Known RBP	11.2	□□□□□ -0.62
YSP3	YOR003W	YBR053C	P38235	358 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	BTT1	P40314	149 aa	Predicted RBP	11.2	□□□□□ -0.62
YSP3	YOR003W	YGR111W	P53265	400 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	VPS38	Q05919	439 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	BSP1	Q06604	576 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	YCG1	Q06680	1035 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	SIL1	Q08199	421 aa		11.2	□□□□□ -0.62
YSP3	YOR003W	CYC8	P14922	966 aa		11.19	□□□□□ -0.62
YSP3	YOR003W	AEP2	P22136	580 aa		11.19	□□□□□ -0.62
YSP3	YOR003W	SRB2	P34162	210 aa		11.19	□□□□□ -0.62
YSP3	YOR003W	EBP2	P36049	427 aa	Known RBP	11.19	□□□□□ -0.62
YSP3	YOR003W	YER189W	P40104	122 aa		11.19	□□□□□ -0.62
YSP3	YOR003W	PSP1	P50896	841 aa	Known RBP	11.19	□□□□□ -0.62
YSP3	YOR003W	YPL062W	Q02781	134 aa		11.19	□□□□□ -0.62
YSP3	YOR003W	LEE1	Q02799	301 aa	Known RBP	11.19	□□□□□ -0.62
YSP3	YOR003W	SPT5	P27692	1063 aa	Known RBP	11.18	□□□□□ -0.62
YSP3	YOR003W	DSF2	P38213	736 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	PRK1	P40494	810 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	SNZ3	P43545	298 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	SNZ2	P53824	298 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	ELP3	Q02908	557 aa	Known RBP	11.18	□□□□□ -0.62
YSP3	YOR003W	SPG3	Q04398	127 aa	Predicted RBP	11.18	□□□□□ -0.62
YSP3	YOR003W	YDR344C	Q05510	147 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	AIM39	Q08223	395 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	SPE3	Q12074	293 aa	Known RBP	11.18	□□□□□ -0.62
YSP3	YOR003W	RAD57	P25301	460 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	ISF1	P32488	338 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	HSL7	P38274	827 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	NUP60	P39705	539 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	YGR021W	P53212	290 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	YNR014W	P53719	212 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	YNL144C	P53907	740 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	SOV1	Q04748	898 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	YRR1	Q12172	810 aa		11.18	□□□□□ -0.62
YSP3	YOR003W	MTF1	P14908	341 aa	Known RBP	11.17	□□□□□ -0.62
YSP3	YOR003W	EST1	P17214	699 aa	Predicted RBP	11.17	□□□□□ -0.62
YSP3	YOR003W	RGR1	P19263	1082 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	SIR1	P21691	654 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	STE11	P23561	717 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	PPH22	P23595	377 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	PUP3	P25451	205 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 146.9 ms