RNA–Protein interactions for RNA: YOL143C

RIB4, Transcript of Lumazine synthase (DMRL synthase), yeast

Gene RIB4, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB4	YOL143C	NPY1	P53164	384 aa		4.6	□□□□□ -1.67
RIB4	YOL143C	YNL193W	P53870	558 aa		4.6	□□□□□ -1.67
RIB4	YOL143C	NRG1	Q03125	231 aa		4.6	□□□□□ -1.67
RIB4	YOL143C	NHX1	Q04121	633 aa		4.6	□□□□□ -1.67
RIB4	YOL143C	GSF2	Q04697	403 aa	Known RBP	4.6	□□□□□ -1.67
RIB4	YOL143C	TGL5	Q12043	749 aa		4.6	□□□□□ -1.67
RIB4	YOL143C	BUG1	Q12191	341 aa		4.6	□□□□□ -1.67
RIB4	YOL143C	HMG1	P12683	1054 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	SFL1	P20134	766 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	KTR4	P38131	464 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	SUL1	P38359	859 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	YFL052W	P43551	465 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	MET13	P53128	600 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	ATG33	Q06485	197 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	YOL073C	Q08232	322 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	NYV1	Q12255	253 aa		4.59	□□□□□ -1.67
RIB4	YOL143C	YIL177C	P40434	1758 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	YJL225C	P40889	1758 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	HSL7	P38274	827 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	PCM1	P38628	557 aa	Known RBP	4.58	□□□□□ -1.68
RIB4	YOL143C	SIC1	P38634	284 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	ELO3	P40319	345 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	RMT2	Q03305	412 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	THI22	Q06490	572 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	ALE1	Q08548	619 aa		4.58	□□□□□ -1.68
RIB4	YOL143C	MLP1	Q02455	1875 aa	Known RBP	4.58	□□□□□ -1.68
RIB4	YOL143C	ALG7	P07286	448 aa		4.57	□□□□□ -1.68
RIB4	YOL143C	NGG1	P32494	702 aa		4.57	□□□□□ -1.68
RIB4	YOL143C	YBR053C	P38235	358 aa		4.57	□□□□□ -1.68
RIB4	YOL143C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
RIB4	YOL143C	MPP10	P47083	593 aa	Known RBP	4.57	□□□□□ -1.68
RIB4	YOL143C	ARP4	P80428	489 aa		4.57	□□□□□ -1.68
RIB4	YOL143C	LEE1	Q02799	301 aa	Known RBP	4.57	□□□□□ -1.68
RIB4	YOL143C	DLT1	Q04216	342 aa		4.57	□□□□□ -1.68
RIB4	YOL143C	RPN7	Q06103	429 aa	Known RBP	4.57	□□□□□ -1.68
RIB4	YOL143C	ADR1	P07248	1323 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	MET3	P08536	511 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	CAF20	P12962	161 aa	Known RBP	4.56	□□□□□ -1.68
RIB4	YOL143C	ADE2	P21264	571 aa	Known RBP	4.56	□□□□□ -1.68
RIB4	YOL143C	YEL1	P34225	687 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	MIP6	P38760	659 aa	Known RBP	4.56	□□□□□ -1.68
RIB4	YOL143C	MAM1	P40065	302 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	EAF6	P47128	113 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	YJR142W	P47173	342 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	TEX1	P53851	422 aa	Known RBP	4.56	□□□□□ -1.68
RIB4	YOL143C	MDG1	P53885	366 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	RNT1	Q02555	471 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	YMR206W	Q03695	313 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	YDL144C	Q07589	356 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	RTT109	Q07794	436 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	RIX7	Q07844	837 aa	Known RBP	4.56	□□□□□ -1.68
RIB4	YOL143C	FRE5	Q08908	694 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	GIN4	Q12263	1142 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	PNS1	Q12412	539 aa		4.56	□□□□□ -1.68
RIB4	YOL143C	PPR1	P07272	904 aa	Predicted RBP	4.55	□□□□□ -1.68
RIB4	YOL143C	CCR4	P31384	837 aa	Known RBP	4.55	□□□□□ -1.68
RIB4	YOL143C	YFR016C	P43597	1233 aa	Known RBP	4.55	□□□□□ -1.68
RIB4	YOL143C	PRP31	P49704	494 aa	Predicted RBP	4.55	□□□□□ -1.68
RIB4	YOL143C	HEF3	P53978	1044 aa	Known RBP	4.55	□□□□□ -1.68
RIB4	YOL143C	SSP2	Q08646	371 aa		4.55	□□□□□ -1.68
RIB4	YOL143C	CTI6	Q08923	506 aa		4.55	□□□□□ -1.68
RIB4	YOL143C	BMS1	Q08965	1183 aa	Known RBP	4.55	□□□□□ -1.68
RIB4	YOL143C	FKS3	Q04952	1785 aa		4.55	□□□□□ -1.68
RIB4	YOL143C	TOM1	Q03280	3268 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	LPD1	P09624	499 aa	Known RBP	4.54	□□□□□ -1.68
RIB4	YOL143C	SFP1	P32432	683 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	SER1	P33330	395 aa	Known RBP	4.54	□□□□□ -1.68
RIB4	YOL143C	MNN4	P36044	1178 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	YKR018C	P36114	725 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	YBR259W	P38338	688 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	YHR112C	P38716	378 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	DOT6	P40059	670 aa	Known RBP	4.54	□□□□□ -1.68
RIB4	YOL143C	MGS1	P40151	587 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	YIR042C	P40586	236 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	PCL10	P53124	433 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	ZDS2	P54786	942 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	ORC4	P54791	529 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	MUK1	Q02866	612 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	ADY4	Q05955	493 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	IRC13	Q08630	104 aa		4.54	□□□□□ -1.68
RIB4	YOL143C	SNF2	P22082	1703 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	RPP0	P05317	312 aa	Known RBP	4.53	□□□□□ -1.68
RIB4	YOL143C	ERG6	P25087	383 aa	Known RBP	4.53	□□□□□ -1.68
RIB4	YOL143C	APL2	P36000	726 aa	Predicted RBP	4.53	□□□□□ -1.68
RIB4	YOL143C	PPS1	P38148	807 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	HOS4	P40480	1083 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	YJL163C	P46996	555 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	YGL082W	P53155	381 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	SDA1	P53313	767 aa	Known RBP	4.53	□□□□□ -1.68
RIB4	YOL143C	ARG5,6	Q01217	863 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	COG8	Q04632	607 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	RGC1	Q06108	1083 aa	Known RBP	4.53	□□□□□ -1.68
RIB4	YOL143C	YOL057W	Q08225	711 aa		4.53	□□□□□ -1.68
RIB4	YOL143C	CTT1	P06115	562 aa		4.52	□□□□□ -1.69
RIB4	YOL143C	SUI2	P20459	304 aa	Known RBP	4.52	□□□□□ -1.69
RIB4	YOL143C	SPC42	P36094	363 aa		4.52	□□□□□ -1.69
RIB4	YOL143C	LYS9	P38999	446 aa		4.52	□□□□□ -1.69
RIB4	YOL143C	AMA1	P50082	593 aa		4.52	□□□□□ -1.69
RIB4	YOL143C	MTL1	P53214	551 aa		4.52	□□□□□ -1.69
RIB4	YOL143C	BRE5	P53741	515 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms