RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W MCH5Q08777 521 aa4.32□□□□□ -1.72
VPS27YNR006W RTK1Q12100 620 aaPredicted RBP4.32□□□□□ -1.72
VPS27YNR006W PSF3Q12146 194 aa4.32□□□□□ -1.72
VPS27YNR006W PGA3Q12746 312 aaKnown RBP4.32□□□□□ -1.72
VPS27YNR006W CDC16P09798 840 aa4.31□□□□□ -1.72
VPS27YNR006W PGS1P25578 521 aa4.31□□□□□ -1.72
VPS27YNR006W AIM26P32858 118 aa4.31□□□□□ -1.72
VPS27YNR006W YBR138CP38277 524 aa4.31□□□□□ -1.72
VPS27YNR006W SRP68P38687 599 aaKnown RBP4.31□□□□□ -1.72
VPS27YNR006W YER010CP40011 234 aa4.31□□□□□ -1.72
VPS27YNR006W RMD8P43620 662 aa4.31□□□□□ -1.72
VPS27YNR006W BRE5P53741 515 aaKnown RBP4.31□□□□□ -1.72
VPS27YNR006W NOP15P53927 220 aaPredicted RBP4.31□□□□□ -1.72
VPS27YNR006W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
VPS27YNR006W SSY1Q03770 852 aa4.31□□□□□ -1.72
VPS27YNR006W UTP21Q06078 939 aaPredicted RBP4.31□□□□□ -1.72
VPS27YNR006W XYL2Q07993 356 aa4.31□□□□□ -1.72
VPS27YNR006W THI21Q08975 551 aa4.31□□□□□ -1.72
VPS27YNR006W TAH18Q12181 623 aa4.31□□□□□ -1.72
VPS27YNR006W NSI1Q12457 570 aa4.31□□□□□ -1.72
VPS27YNR006W FUR1P18562 216 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W MCM3P24279 971 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W CBF2P32504 956 aa4.3□□□□□ -1.72
VPS27YNR006W NPL6P32832 435 aa4.3□□□□□ -1.72
VPS27YNR006W SDS22P36047 338 aa4.3□□□□□ -1.72
VPS27YNR006W SET5P38890 526 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W STT3P39007 718 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W CAJ1P39101 391 aa4.3□□□□□ -1.72
VPS27YNR006W CTF18P49956 741 aa4.3□□□□□ -1.72
VPS27YNR006W YGR130CP53278 816 aa4.3□□□□□ -1.72
VPS27YNR006W LEE1Q02799 301 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W NUC1P08466 329 aa4.3□□□□□ -1.72
VPS27YNR006W RPC53P25441 422 aa4.3□□□□□ -1.72
VPS27YNR006W PXA2P34230 853 aa4.3□□□□□ -1.72
VPS27YNR006W LRP1P38801 184 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W MAD2P40958 196 aa4.3□□□□□ -1.72
VPS27YNR006W SHR5P41912 237 aa4.3□□□□□ -1.72
VPS27YNR006W YML6P51998 286 aa4.3□□□□□ -1.72
VPS27YNR006W ARE2P53629 642 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W SYF1Q04048 859 aaPredicted RBP4.3□□□□□ -1.72
VPS27YNR006W YLR407WQ06070 228 aa4.3□□□□□ -1.72
VPS27YNR006W PUS1Q12211 544 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W RIB2Q12362 591 aaKnown RBP4.3□□□□□ -1.72
VPS27YNR006W CYB2P00175 591 aa4.29□□□□□ -1.72
VPS27YNR006W LEU2P04173 364 aaPredicted RBP4.29□□□□□ -1.72
VPS27YNR006W VAS1P07806 1104 aaKnown RBP4.29□□□□□ -1.72
VPS27YNR006W YEL076C-AP0CX16 216 aa4.29□□□□□ -1.72
VPS27YNR006W YLR464WP0CX17 216 aa4.29□□□□□ -1.72
VPS27YNR006W DPH2P32461 534 aa4.29□□□□□ -1.72
VPS27YNR006W FLR1P38124 548 aa4.29□□□□□ -1.72
VPS27YNR006W RFC5P38251 354 aa4.29□□□□□ -1.72
VPS27YNR006W PPE1P38796 400 aa4.29□□□□□ -1.72
VPS27YNR006W YEL076CP39971 216 aa4.29□□□□□ -1.72
VPS27YNR006W YFL052WP43551 465 aa4.29□□□□□ -1.72
VPS27YNR006W CBK1P53894 756 aa4.29□□□□□ -1.72
VPS27YNR006W SSL2Q00578 843 aa4.29□□□□□ -1.72
VPS27YNR006W YPR196WQ06595 470 aa4.29□□□□□ -1.72
VPS27YNR006W DIN7Q12086 430 aa4.29□□□□□ -1.72
VPS27YNR006W OSW2Q12202 724 aa4.29□□□□□ -1.72
VPS27YNR006W YOR022CQ12204 715 aa4.29□□□□□ -1.72
VPS27YNR006W PHO5P00635 467 aa4.28□□□□□ -1.72
VPS27YNR006W TRP3P00937 484 aa4.28□□□□□ -1.72
VPS27YNR006W CBP3P21560 335 aa4.28□□□□□ -1.72
VPS27YNR006W RFA1P22336 621 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W KRR1P25586 316 aaPredicted RBP4.28□□□□□ -1.72
VPS27YNR006W MF(ALPHA)2P32435 120 aa4.28□□□□□ -1.72
VPS27YNR006W RPT3P33298 428 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W SAP190P36123 1033 aa4.28□□□□□ -1.72
VPS27YNR006W SET3P36124 751 aa4.28□□□□□ -1.72
VPS27YNR006W ECM21P38167 1117 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W YBR225WP38321 900 aa4.28□□□□□ -1.72
VPS27YNR006W NPR2P39923 615 aa4.28□□□□□ -1.72
VPS27YNR006W LSM5P40089 93 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W AXL1P40851 1208 aa4.28□□□□□ -1.72
VPS27YNR006W LPX1Q12405 387 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W CYC7P00045 113 aa4.28□□□□□ -1.72
VPS27YNR006W NOT3P06102 836 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W FUM1P08417 488 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W OLE1P21147 510 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W CDC60P26637 1090 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W AKL1P38080 1108 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W CEP3P40969 608 aa4.28□□□□□ -1.72
VPS27YNR006W SNO4Q04902 237 aa4.28□□□□□ -1.72
VPS27YNR006W MFB1Q04922 465 aa4.28□□□□□ -1.72
VPS27YNR006W YDR286CQ05530 114 aa4.28□□□□□ -1.72
VPS27YNR006W HSP33Q08914 237 aaKnown RBP4.28□□□□□ -1.72
VPS27YNR006W HSP32Q08992 237 aa4.28□□□□□ -1.72
VPS27YNR006W HAL9Q12180 1030 aa4.28□□□□□ -1.72
VPS27YNR006W RPS17AP02407 136 aaKnown RBP4.27□□□□□ -1.73
VPS27YNR006W ILS1P09436 1072 aaKnown RBP4.27□□□□□ -1.73
VPS27YNR006W RPS17BP14127 136 aaKnown RBP4.27□□□□□ -1.73
VPS27YNR006W SIR1P21691 654 aa4.27□□□□□ -1.73
VPS27YNR006W CLB4P24871 460 aa4.27□□□□□ -1.73
VPS27YNR006W RPC82P32349 654 aa4.27□□□□□ -1.73
VPS27YNR006W ERG3P32353 365 aa4.27□□□□□ -1.73
VPS27YNR006W SRP72P38688 640 aaKnown RBP4.27□□□□□ -1.73
VPS27YNR006W PSF2P40359 213 aa4.27□□□□□ -1.73
VPS27YNR006W LYS14P40971 790 aa4.27□□□□□ -1.73
VPS27YNR006W YKR011CQ02209 353 aa4.27□□□□□ -1.73
VPS27YNR006W YPL071CQ02864 156 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms