RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W BUD6P41697 788 aa5.03□□□□□ -1.6
RPP0YLR340W YAT1P80235 687 aa5.03□□□□□ -1.6
RPP0YLR340W WAR1Q03631 944 aa5.03□□□□□ -1.6
RPP0YLR340W UTP14Q04500 899 aaKnown RBP5.03□□□□□ -1.6
RPP0YLR340W PRM6Q04705 352 aa5.03□□□□□ -1.6
RPP0YLR340W SGT2Q12118 346 aaKnown RBP5.03□□□□□ -1.6
RPP0YLR340W PTC5Q12511 572 aa5.03□□□□□ -1.6
RPP0YLR340W BRR2P32639 2163 aaKnown RBP5.03□□□□□ -1.6
RPP0YLR340W REV1P12689 985 aa5.02□□□□□ -1.61
RPP0YLR340W ISY1P21374 235 aaPredicted RBP5.02□□□□□ -1.61
RPP0YLR340W KIN3P22209 435 aa5.02□□□□□ -1.61
RPP0YLR340W DAL1P32375 460 aa5.02□□□□□ -1.61
RPP0YLR340W TKL2P33315 681 aa5.02□□□□□ -1.61
RPP0YLR340W YEL1P34225 687 aa5.02□□□□□ -1.61
RPP0YLR340W OCA5P38738 679 aa5.02□□□□□ -1.61
RPP0YLR340W YHL017WP38745 532 aa5.02□□□□□ -1.61
RPP0YLR340W RAD55P38953 406 aa5.02□□□□□ -1.61
RPP0YLR340W NUP60P39705 539 aa5.02□□□□□ -1.61
RPP0YLR340W YIL161WP40449 235 aaKnown RBP5.02□□□□□ -1.61
RPP0YLR340W VTC4P47075 721 aa5.02□□□□□ -1.61
RPP0YLR340W RTC4P53850 401 aa5.02□□□□□ -1.61
RPP0YLR340W CEG1Q01159 459 aaPredicted RBP5.02□□□□□ -1.61
RPP0YLR340W TFB3Q03290 321 aa5.02□□□□□ -1.61
RPP0YLR340W SEG1Q04279 960 aa5.02□□□□□ -1.61
RPP0YLR340W GPM2Q12008 311 aa5.02□□□□□ -1.61
RPP0YLR340W UTP20P35194 2493 aaKnown RBP5.02□□□□□ -1.61
RPP0YLR340W RPP2BP02400 110 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W SPT5P27692 1063 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W SAP190P36123 1033 aa5.01□□□□□ -1.61
RPP0YLR340W SHE3P38272 425 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W DLD3P39976 496 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W NPP2P39997 493 aa5.01□□□□□ -1.61
RPP0YLR340W ERG10P41338 398 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W THI6P41835 540 aa5.01□□□□□ -1.61
RPP0YLR340W HSH155P49955 971 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W LYS5P50113 272 aa5.01□□□□□ -1.61
RPP0YLR340W UBA2P52488 636 aa5.01□□□□□ -1.61
RPP0YLR340W YNL011CP53980 444 aa5.01□□□□□ -1.61
RPP0YLR340W GCN5Q03330 439 aa5.01□□□□□ -1.61
RPP0YLR340W ISR1Q06098 443 aaKnown RBP5.01□□□□□ -1.61
RPP0YLR340W YPL277CQ08989 487 aa5.01□□□□□ -1.61
RPP0YLR340W MCM16Q12262 181 aa5.01□□□□□ -1.61
RPP0YLR340W BI4P03879 638 aa5□□□□□ -1.61
RPP0YLR340W CHS1P08004 1131 aa5□□□□□ -1.61
RPP0YLR340W PHO8P11491 566 aa5□□□□□ -1.61
RPP0YLR340W TFB1P32776 642 aa5□□□□□ -1.61
RPP0YLR340W KDX1P36005 433 aa5□□□□□ -1.61
RPP0YLR340W PPX1P38698 397 aa5□□□□□ -1.61
RPP0YLR340W PIK1P39104 1066 aa5□□□□□ -1.61
RPP0YLR340W GDH3P39708 457 aa5□□□□□ -1.61
RPP0YLR340W OSW5P40219 148 aa5□□□□□ -1.61
RPP0YLR340W SDS3P40505 327 aa5□□□□□ -1.61
RPP0YLR340W DAS1P47005 663 aa5□□□□□ -1.61
RPP0YLR340W TOF2Q02208 771 aa5□□□□□ -1.61
RPP0YLR340W HEL2Q05580 639 aaKnown RBP5□□□□□ -1.61
RPP0YLR340W YPR027CQ12079 277 aa5□□□□□ -1.61
RPP0YLR340W WTM2Q12206 467 aa5□□□□□ -1.61
RPP0YLR340W HFA1P32874 2273 aa5□□□□□ -1.61
RPP0YLR340W FOB1O13329 566 aa4.99□□□□□ -1.61
RPP0YLR340W DAT1P13483 248 aaKnown RBP4.99□□□□□ -1.61
RPP0YLR340W MUD1P32605 298 aaKnown RBP4.99□□□□□ -1.61
RPP0YLR340W PPS1P38148 807 aa4.99□□□□□ -1.61
RPP0YLR340W LEU5P38702 357 aa4.99□□□□□ -1.61
RPP0YLR340W AVT2P39981 480 aa4.99□□□□□ -1.61
RPP0YLR340W SHQ1P40486 507 aaPredicted RBP4.99□□□□□ -1.61
RPP0YLR340W DAK2P43550 591 aa4.99□□□□□ -1.61
RPP0YLR340W CTF18P49956 741 aa4.99□□□□□ -1.61
RPP0YLR340W YNR065CP53751 1116 aa4.99□□□□□ -1.61
RPP0YLR340W TDA7P53882 636 aaPredicted RBP4.99□□□□□ -1.61
RPP0YLR340W ECM22Q05958 814 aaPredicted RBP4.99□□□□□ -1.61
RPP0YLR340W YCG1Q06680 1035 aa4.99□□□□□ -1.61
RPP0YLR340W DAL7P21826 554 aa4.98□□□□□ -1.61
RPP0YLR340W PUF4P25339 888 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
RPP0YLR340W FRE1P32791 686 aa4.98□□□□□ -1.61
RPP0YLR340W SRX1P36077 127 aa4.98□□□□□ -1.61
RPP0YLR340W ATG12P38316 186 aa4.98□□□□□ -1.61
RPP0YLR340W YBR225WP38321 900 aa4.98□□□□□ -1.61
RPP0YLR340W NPA3P47122 385 aa4.98□□□□□ -1.61
RPP0YLR340W SMA1Q02651 245 aa4.98□□□□□ -1.61
RPP0YLR340W TSR1Q07381 788 aaKnown RBP4.98□□□□□ -1.61
RPP0YLR340W PSK2Q08217 1101 aa4.98□□□□□ -1.61
RPP0YLR340W MSF1P08425 469 aa4.97□□□□□ -1.61
RPP0YLR340W NAT1P12945 854 aaKnown RBP4.97□□□□□ -1.61
RPP0YLR340W DSS4P32601 143 aa4.97□□□□□ -1.61
RPP0YLR340W RFC5P38251 354 aa4.97□□□□□ -1.61
RPP0YLR340W WSC4P38739 605 aa4.97□□□□□ -1.61
RPP0YLR340W BAT1P38891 393 aaKnown RBP4.97□□□□□ -1.61
RPP0YLR340W SSN3P39073 555 aa4.97□□□□□ -1.61
RPP0YLR340W FHL1P39521 936 aa4.97□□□□□ -1.61
RPP0YLR340W FTR1P40088 404 aa4.97□□□□□ -1.61
RPP0YLR340W YFL034WP43564 1073 aa4.97□□□□□ -1.61
RPP0YLR340W SMC3P47037 1230 aa4.97□□□□□ -1.61
RPP0YLR340W NBP1P52919 319 aaPredicted RBP4.97□□□□□ -1.61
RPP0YLR340W CUZ1P53899 274 aa4.97□□□□□ -1.61
RPP0YLR340W YPL014WQ02606 381 aa4.97□□□□□ -1.61
RPP0YLR340W MUB1Q03162 620 aa4.97□□□□□ -1.61
RPP0YLR340W HIS4P00815 799 aaKnown RBP4.96□□□□□ -1.62
RPP0YLR340W URA1P28272 314 aaPredicted RBP4.96□□□□□ -1.62
RPP0YLR340W SFP1P32432 683 aa4.96□□□□□ -1.62
RPP0YLR340W UTR2P32623 467 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms