RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD3	YLR147C	NUP145	P49687	1317 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	CDC43	P18898	376 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	TDP1	P38319	544 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	YJL206C	P39529	758 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	OAF1	P39720	1047 aa	Predicted RBP	5.01	□□□□□ -1.61
SMD3	YLR147C	YIL077C	P40508	320 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	CTR1	P49573	406 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	HFI1	Q12060	488 aa		5.01	□□□□□ -1.61
SMD3	YLR147C	CHS5	Q12114	671 aa	Known RBP	5.01	□□□□□ -1.61
SMD3	YLR147C	ERG20	P08524	352 aa	Known RBP	5	□□□□□ -1.61
SMD3	YLR147C	RPS21A	P0C0V8	87 aa	Known RBP	5	□□□□□ -1.61
SMD3	YLR147C	SEC65	P29478	273 aa		5	□□□□□ -1.61
SMD3	YLR147C	GLG1	P36143	616 aa		5	□□□□□ -1.61
SMD3	YLR147C	BFA1	P47113	574 aa		5	□□□□□ -1.61
SMD3	YLR147C	RFX1	P48743	811 aa		5	□□□□□ -1.61
SMD3	YLR147C	YGR237C	P50089	785 aa		5	□□□□□ -1.61
SMD3	YLR147C	STP4	Q07351	490 aa		5	□□□□□ -1.61
SMD3	YLR147C	MSS1	P32559	526 aa	Predicted RBP	4.99	□□□□□ -1.61
SMD3	YLR147C	FAT1	P38225	669 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	COS111	P38308	924 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	YHR097C	P38809	366 aa	Known RBP	4.99	□□□□□ -1.61
SMD3	YLR147C	UBP12	P39538	1254 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	BUD8	P41698	603 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	MNN11	P46985	422 aa	Known RBP	4.99	□□□□□ -1.61
SMD3	YLR147C	MPS3	P47069	682 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	YGR151C	P53287	111 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	NOP15	P53927	220 aa	Predicted RBP	4.99	□□□□□ -1.61
SMD3	YLR147C	HFD1	Q04458	532 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	YFT2	Q06676	274 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	APM4	Q99186	491 aa		4.99	□□□□□ -1.61
SMD3	YLR147C	RPS17A	P02407	136 aa	Known RBP	4.98	□□□□□ -1.61
SMD3	YLR147C	RPS17B	P14127	136 aa	Known RBP	4.98	□□□□□ -1.61
SMD3	YLR147C	GFA1	P14742	717 aa	Known RBP	4.98	□□□□□ -1.61
SMD3	YLR147C	KIN82	P25341	720 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	DMC1	P25453	334 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	EMP70	P32802	667 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	OAF3	P36023	863 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	BDH2	P39713	417 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	GIS1	Q03833	894 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	YHM2	Q04013	314 aa		4.98	□□□□□ -1.61
SMD3	YLR147C	VBA4	Q04602	768 aa	Known RBP	4.98	□□□□□ -1.61
SMD3	YLR147C	FUB1	P25659	250 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	DID4	P36108	232 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	CTP1	P38152	299 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	KHA1	P40309	873 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	PXA1	P41909	870 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	IES1	P43579	692 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	YDL086W	Q07505	273 aa		4.97	□□□□□ -1.61
SMD3	YLR147C	FAP7	Q12055	197 aa	Predicted RBP	4.97	□□□□□ -1.61
SMD3	YLR147C	GLN4	P13188	809 aa	Known RBP	4.95	□□□□□ -1.62
SMD3	YLR147C	HCA4	P20448	770 aa	Known RBP	4.95	□□□□□ -1.62
SMD3	YLR147C	GMH1	P36125	273 aa		4.95	□□□□□ -1.62
SMD3	YLR147C	KSP1	P38691	1029 aa	Known RBP	4.95	□□□□□ -1.62
SMD3	YLR147C	YIL166C	P40445	542 aa		4.95	□□□□□ -1.62
SMD3	YLR147C	YGL081W	P53156	320 aa		4.95	□□□□□ -1.62
SMD3	YLR147C	RPS9B	P05755	195 aa	Known RBP	4.94	□□□□□ -1.62
SMD3	YLR147C	ABF1	P14164	731 aa		4.94	□□□□□ -1.62
SMD3	YLR147C	CDC26	P14724	124 aa		4.94	□□□□□ -1.62
SMD3	YLR147C	SEC15	P22224	910 aa		4.94	□□□□□ -1.62
SMD3	YLR147C	PRP22	P24384	1145 aa	Known RBP	4.94	□□□□□ -1.62
SMD3	YLR147C	PRE4	P30657	266 aa		4.94	□□□□□ -1.62
SMD3	YLR147C	PTA1	Q01329	785 aa	Predicted RBP	4.94	□□□□□ -1.62
SMD3	YLR147C	IZH3	Q07959	543 aa		4.94	□□□□□ -1.62
SMD3	YLR147C	BNR1	P40450	1375 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	DAL3	P32459	195 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	CDS1	P38221	457 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	DUN1	P39009	513 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	VID28	P40547	921 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	TAF4	P50105	388 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	NMA2	P53204	395 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	SPO1	P53541	631 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	YSH1	Q06224	779 aa	Predicted RBP	4.93	□□□□□ -1.62
SMD3	YLR147C	AIM44	Q99299	758 aa		4.93	□□□□□ -1.62
SMD3	YLR147C	GRX4	P32642	244 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	YEL020C	P39994	560 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	MIT1	P40002	666 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	YEN1	P40028	759 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	SNF12	P53628	566 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	NSE5	Q03718	556 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	PPN1	Q04119	674 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	BMS1	Q08965	1183 aa	Known RBP	4.92	□□□□□ -1.62
SMD3	YLR147C	RKI1	Q12189	258 aa		4.92	□□□□□ -1.62
SMD3	YLR147C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SMD3	YLR147C	KCC4	P25389	1037 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	ADY2	P25613	283 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	NTH1	P32356	751 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	MF(ALPHA)2	P32435	120 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	MTC7	P32633	139 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	PPZ2	P33329	710 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	SER1	P33330	395 aa	Known RBP	4.91	□□□□□ -1.62
SMD3	YLR147C	YPT53	P36019	220 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	FLO10	P36170	1169 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	YMC2	P38087	329 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	CRG1	P38892	291 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
SMD3	YLR147C	GPP2	P40106	250 aa	Known RBP	4.91	□□□□□ -1.62
SMD3	YLR147C	DUG1	P43616	481 aa	Known RBP	4.91	□□□□□ -1.62
SMD3	YLR147C	LAM4	P38800	1345 aa		4.91	□□□□□ -1.62
SMD3	YLR147C	TUB1	P09733	447 aa	Known RBP	4.9	□□□□□ -1.63
SMD3	YLR147C	TUP1	P16649	713 aa		4.9	□□□□□ -1.63
SMD3	YLR147C	EUG1	P32474	517 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms