RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SUL1P38359 859 aa4.05□□□□□ -1.76
SDO1YLR022C AFG3P39925 761 aa4.05□□□□□ -1.76
SDO1YLR022C RSP5P39940 809 aaKnown RBP4.05□□□□□ -1.76
SDO1YLR022C RTA1P53047 317 aa4.05□□□□□ -1.76
SDO1YLR022C PUS2P53167 370 aa4.05□□□□□ -1.76
SDO1YLR022C DAM1P53267 343 aa4.05□□□□□ -1.76
SDO1YLR022C ASI2P53895 289 aa4.05□□□□□ -1.76
SDO1YLR022C RNT1Q02555 471 aa4.05□□□□□ -1.76
SDO1YLR022C HAL9Q12180 1030 aa4.05□□□□□ -1.76
SDO1YLR022C DAL7P21826 554 aa4.04□□□□□ -1.76
SDO1YLR022C CYS3P31373 394 aaKnown RBP4.04□□□□□ -1.76
SDO1YLR022C OCT1P35999 772 aa4.04□□□□□ -1.76
SDO1YLR022C ALG2P43636 503 aa4.04□□□□□ -1.76
SDO1YLR022C NNF1P47149 201 aa4.04□□□□□ -1.76
SDO1YLR022C TAD1P53065 400 aa4.04□□□□□ -1.76
SDO1YLR022C ORC1P54784 914 aaPredicted RBP4.04□□□□□ -1.76
SDO1YLR022C ATP25Q03153 612 aa4.04□□□□□ -1.76
SDO1YLR022C NSE3Q05541 303 aa4.04□□□□□ -1.76
SDO1YLR022C OMS1Q06668 471 aa4.04□□□□□ -1.76
SDO1YLR022C TRM13Q12383 476 aa4.04□□□□□ -1.76
SDO1YLR022C PPR1P07272 904 aaPredicted RBP4.03□□□□□ -1.76
SDO1YLR022C STI1P15705 589 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SDO1YLR022C GAL11P19659 1081 aa4.03□□□□□ -1.76
SDO1YLR022C YMR206WQ03695 313 aa4.03□□□□□ -1.76
SDO1YLR022C VPS64Q03944 604 aa4.03□□□□□ -1.76
SDO1YLR022C LRS4Q04087 347 aaKnown RBP4.03□□□□□ -1.76
SDO1YLR022C REH1Q06709 432 aa4.03□□□□□ -1.76
SDO1YLR022C MET7Q08645 548 aa4.03□□□□□ -1.76
SDO1YLR022C YOR022CQ12204 715 aa4.03□□□□□ -1.76
SDO1YLR022C TEL1P38110 2787 aa4.02□□□□□ -1.77
SDO1YLR022C ALG7P07286 448 aa4.02□□□□□ -1.77
SDO1YLR022C AKL1P38080 1108 aaKnown RBP4.02□□□□□ -1.77
SDO1YLR022C RPP1P38786 293 aa4.02□□□□□ -1.77
SDO1YLR022C SPL2P38839 148 aa4.02□□□□□ -1.77
SDO1YLR022C KEL1P38853 1164 aaKnown RBP4.02□□□□□ -1.77
SDO1YLR022C ELO3P40319 345 aa4.02□□□□□ -1.77
SDO1YLR022C VHR1P40522 640 aa4.02□□□□□ -1.77
SDO1YLR022C RSC8P43609 557 aaKnown RBP4.02□□□□□ -1.77
SDO1YLR022C ART5P53244 586 aaKnown RBP4.02□□□□□ -1.77
SDO1YLR022C MRPS35P53292 345 aa4.02□□□□□ -1.77
SDO1YLR022C THI21Q08975 551 aa4.02□□□□□ -1.77
SDO1YLR022C CDC53Q12018 815 aaKnown RBP4.02□□□□□ -1.77
SDO1YLR022C PRC1P00729 532 aa4.01□□□□□ -1.77
SDO1YLR022C MET3P08536 511 aa4.01□□□□□ -1.77
SDO1YLR022C YCL002CP25565 263 aa4.01□□□□□ -1.77
SDO1YLR022C SPC29P33419 253 aa4.01□□□□□ -1.77
SDO1YLR022C KSP1P38691 1029 aaKnown RBP4.01□□□□□ -1.77
SDO1YLR022C VAB2P40003 282 aa4.01□□□□□ -1.77
SDO1YLR022C JHD1P40034 492 aa4.01□□□□□ -1.77
SDO1YLR022C LYS14P40971 790 aa4.01□□□□□ -1.77
SDO1YLR022C PKH1Q03407 766 aa4.01□□□□□ -1.77
SDO1YLR022C MUS81Q04149 632 aaPredicted RBP4.01□□□□□ -1.77
SDO1YLR022C DLT1Q04216 342 aa4.01□□□□□ -1.77
SDO1YLR022C RPL40AP0CH08 128 aaKnown RBP4□□□□□ -1.77
SDO1YLR022C RPL40BP0CH09 128 aaKnown RBP4□□□□□ -1.77
SDO1YLR022C SET5P38890 526 aaKnown RBP4□□□□□ -1.77
SDO1YLR022C PZF1P39933 429 aa4□□□□□ -1.77
SDO1YLR022C PFA3P42836 336 aa4□□□□□ -1.77
SDO1YLR022C SSY5P47002 699 aa4□□□□□ -1.77
SDO1YLR022C TY4A-JP47023 414 aa4□□□□□ -1.77
SDO1YLR022C HXT16P47185 567 aa4□□□□□ -1.77
SDO1YLR022C YDR514CQ04408 483 aa4□□□□□ -1.77
SDO1YLR022C FRE5Q08908 694 aa4□□□□□ -1.77
SDO1YLR022C ACF2Q12168 779 aa4□□□□□ -1.77
SDO1YLR022C GPR1Q12361 961 aa4□□□□□ -1.77
SDO1YLR022C YOL098CQ12496 1037 aa4□□□□□ -1.77
SDO1YLR022C YBR182C-AQ8TGU6 64 aa4□□□□□ -1.77
SDO1YLR022C YLR415CO13578 112 aa3.99□□□□□ -1.77
SDO1YLR022C MGM1P32266 881 aa3.99□□□□□ -1.77
SDO1YLR022C NGG1P32494 702 aa3.99□□□□□ -1.77
SDO1YLR022C SAP190P36123 1033 aa3.99□□□□□ -1.77
SDO1YLR022C SIC1P38634 284 aa3.99□□□□□ -1.77
SDO1YLR022C ACA1P39970 489 aa3.99□□□□□ -1.77
SDO1YLR022C FKH2P41813 862 aa3.99□□□□□ -1.77
SDO1YLR022C PAP2P53632 584 aaKnown RBP3.99□□□□□ -1.77
SDO1YLR022C DNM1P54861 757 aa3.99□□□□□ -1.77
SDO1YLR022C IRC4Q03036 179 aa3.99□□□□□ -1.77
SDO1YLR022C ADY4Q05955 493 aa3.99□□□□□ -1.77
SDO1YLR022C THI3Q07471 609 aa3.99□□□□□ -1.77
SDO1YLR022C MCH5Q08777 521 aa3.99□□□□□ -1.77
SDO1YLR022C PHR1P05066 565 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
SDO1YLR022C HEM1P09950 548 aaPredicted RBP3.98□□□□□ -1.77
SDO1YLR022C BCS1P32839 456 aa3.98□□□□□ -1.77
SDO1YLR022C YBR053CP38235 358 aa3.98□□□□□ -1.77
SDO1YLR022C OCA5P38738 679 aa3.98□□□□□ -1.77
SDO1YLR022C SAK1P38990 1142 aa3.98□□□□□ -1.77
SDO1YLR022C AMA1P50082 593 aa3.98□□□□□ -1.77
SDO1YLR022C STB4P50104 949 aa3.98□□□□□ -1.77
SDO1YLR022C MUP1P50276 574 aa3.98□□□□□ -1.77
SDO1YLR022C TIM44Q01852 431 aa3.98□□□□□ -1.77
SDO1YLR022C RPN4Q03465 531 aa3.98□□□□□ -1.77
SDO1YLR022C TMN2Q04562 672 aa3.98□□□□□ -1.77
SDO1YLR022C RSC3Q06639 885 aa3.98□□□□□ -1.77
SDO1YLR022C LCB1P25045 558 aaKnown RBP3.97□□□□□ -1.77
SDO1YLR022C GDH3P39708 457 aa3.97□□□□□ -1.77
SDO1YLR022C RLP7P40693 322 aaKnown RBP3.97□□□□□ -1.77
SDO1YLR022C MAL11P53048 616 aa3.97□□□□□ -1.77
SDO1YLR022C ZIP2P53061 704 aa3.97□□□□□ -1.77
SDO1YLR022C LGE1Q02796 332 aaKnown RBP3.97□□□□□ -1.77
SDO1YLR022C MUK1Q02866 612 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms