RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	ROX1	P25042	368 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	MRM1	P25270	412 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	ELM1	P32801	640 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	MRP8	P35719	219 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	MTG2	P38860	518 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	RTS1	P38903	757 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	ASE1	P50275	885 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	TEL2	P53038	688 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	RTA1	P53047	317 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	ECM18	Q04623	453 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	RTT103	Q05543	409 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	LCB5	Q06147	687 aa	Known RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	MRL1	Q06815	381 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	YOR296W	Q08748	1289 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	PSY3	Q12318	242 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	NOT5	Q12514	560 aa	Predicted RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	HEM1	P09950	548 aa	Predicted RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	NCP1	P16603	691 aa	Known RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	ADE2	P21264	571 aa	Known RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	STE50	P25344	346 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	RDS1	P25611	832 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	CWH43	P25618	953 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	MTH1	P35198	433 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	ORC6	P38826	435 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	SAP1	P39955	897 aa	Known RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	YRB2	P40517	327 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	TIM10	P87108	93 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	SHE9	Q04172	456 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	VPS54	Q12071	889 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	MET5	P47169	1442 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	CKA1	P15790	372 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	MRPL8	P22353	238 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	SIF2	P38262	535 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	YBR184W	P38299	523 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	IAH1	P41734	238 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	BNA6	P43619	295 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	VMA10	P48836	114 aa	Known RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	CUS1	Q02554	436 aa	Predicted RBP	4.27	□□□□□ -1.73
NUP133	YKR082W	GTB1	Q04924	702 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	TFC6	Q06339	672 aa		4.27	□□□□□ -1.73
NUP133	YKR082W	RPS9A	O13516	197 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	RPS9B	P05755	195 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	EFT1	P32324	842 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	BET3	P36149	193 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	TYS1	P36421	394 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	YDR089W	P38966	869 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	SEC31	P38968	1273 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	PIC2	P40035	300 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	VHR1	P40522	640 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	YDL183C	P48569	320 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	CGR1	P53188	120 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	YGR054W	P53235	642 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	RET3	P53600	189 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	RSC4	Q02206	625 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	HOS3	Q02959	697 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	GYL1	Q04322	720 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	RBS1	Q05672	457 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	FMP25	Q08023	583 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	TY3A-G	Q12173	290 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	PAR32	Q12515	295 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	TY3A-I	Q99219	290 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	MNE1	P24720	663 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	BMH1	P29311	267 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	DUR3	P33413	735 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	LAS1	P36146	502 aa	Predicted RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	UTP9	P38882	575 aa	Known RBP	4.26	□□□□□ -1.73
NUP133	YKR082W	MRX1	P40050	688 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	NDC80	P40460	691 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	PHB1	P40961	287 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	FET5	P43561	622 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	UBP15	P50101	1230 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	YBP2	P53169	641 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	REG1	Q00816	1014 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	IRC4	Q03036	179 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	MSC3	Q05812	728 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	SEC10	Q06245	871 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	GNT1	Q12096	491 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	MMP1	Q12372	583 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	IML1	P47170	1584 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	VPS51	P36116	164 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	XDJ1	P39102	459 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	GEM1	P39722	662 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	MSS2	P40990	351 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	UFD2	P54860	961 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	RNT1	Q02555	471 aa		4.26	□□□□□ -1.73
NUP133	YKR082W	NUP188	P52593	1655 aa	Known RBP	4.25	□□□□□ -1.73
NUP133	YKR082W	CAR2	P07991	424 aa	Known RBP	4.25	□□□□□ -1.73
NUP133	YKR082W	DSF1	P0CX08	502 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	YNR073C	P0CX09	502 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	POL3	P15436	1097 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	PRI2	P20457	528 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	OLE1	P21147	510 aa	Known RBP	4.25	□□□□□ -1.73
NUP133	YKR082W	AEP2	P22136	580 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	URA7	P28274	579 aa	Known RBP	4.25	□□□□□ -1.73
NUP133	YKR082W	MGM1	P32266	881 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	RAD54	P32863	898 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	SDS22	P36047	338 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	YBR225W	P38321	900 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	RAD55	P38953	406 aa		4.25	□□□□□ -1.73
NUP133	YKR082W	GDH3	P39708	457 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms