RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W SEC6P32844 805 aa4.31□□□□□ -1.72
CAP1YKL007W BIT61P47041 543 aa4.31□□□□□ -1.72
CAP1YKL007W TAH11P47112 604 aa4.31□□□□□ -1.72
CAP1YKL007W YJR142WP47173 342 aa4.31□□□□□ -1.72
CAP1YKL007W APM1Q00776 475 aaPredicted RBP4.31□□□□□ -1.72
CAP1YKL007W MTQ2Q03920 221 aaPredicted RBP4.31□□□□□ -1.72
CAP1YKL007W YLR407WQ06070 228 aa4.31□□□□□ -1.72
CAP1YKL007W USV1Q12132 391 aa4.31□□□□□ -1.72
CAP1YKL007W NUP145P49687 1317 aa4.3□□□□□ -1.72
CAP1YKL007W RPS9BP05755 195 aaKnown RBP4.3□□□□□ -1.72
CAP1YKL007W SWI6P09959 803 aa4.3□□□□□ -1.72
CAP1YKL007W KCC4P25389 1037 aa4.3□□□□□ -1.72
CAP1YKL007W YKU70P32807 602 aa4.3□□□□□ -1.72
CAP1YKL007W YPT7P32939 208 aa4.3□□□□□ -1.72
CAP1YKL007W DID4P36108 232 aa4.3□□□□□ -1.72
CAP1YKL007W GMH1P36125 273 aa4.3□□□□□ -1.72
CAP1YKL007W CCT7P42943 550 aaKnown RBP4.3□□□□□ -1.72
CAP1YKL007W VPS36Q06696 566 aa4.3□□□□□ -1.72
CAP1YKL007W FUB1P25659 250 aa4.29□□□□□ -1.72
CAP1YKL007W CTP1P38152 299 aa4.29□□□□□ -1.72
CAP1YKL007W BRN1P38170 754 aa4.29□□□□□ -1.72
CAP1YKL007W PXA1P41909 870 aa4.29□□□□□ -1.72
CAP1YKL007W MNN11P46985 422 aaKnown RBP4.29□□□□□ -1.72
CAP1YKL007W YGR151CP53287 111 aa4.29□□□□□ -1.72
CAP1YKL007W RGC1Q06108 1083 aaKnown RBP4.29□□□□□ -1.72
CAP1YKL007W YFT2Q06676 274 aa4.29□□□□□ -1.72
CAP1YKL007W YDL086WQ07505 273 aa4.29□□□□□ -1.72
CAP1YKL007W BMS1Q08965 1183 aaKnown RBP4.29□□□□□ -1.72
CAP1YKL007W CUE2P36075 443 aaKnown RBP4.28□□□□□ -1.72
CAP1YKL007W APL3P38065 1025 aa4.28□□□□□ -1.72
CAP1YKL007W UBS1P38290 277 aa4.28□□□□□ -1.72
CAP1YKL007W COS111P38308 924 aa4.28□□□□□ -1.72
CAP1YKL007W YIL077CP40508 320 aa4.28□□□□□ -1.72
CAP1YKL007W MPS3P47069 682 aa4.28□□□□□ -1.72
CAP1YKL007W YGR237CP50089 785 aa4.28□□□□□ -1.72
CAP1YKL007W PTA1Q01329 785 aaPredicted RBP4.28□□□□□ -1.72
CAP1YKL007W ECM9Q02202 377 aa4.28□□□□□ -1.72
CAP1YKL007W YSH1Q06224 779 aaPredicted RBP4.28□□□□□ -1.72
CAP1YKL007W FAP7Q12055 197 aaPredicted RBP4.28□□□□□ -1.72
CAP1YKL007W APM4Q99186 491 aa4.28□□□□□ -1.72
CAP1YKL007W RPS17AP02407 136 aaKnown RBP4.27□□□□□ -1.73
CAP1YKL007W TUB1P09733 447 aaKnown RBP4.27□□□□□ -1.73
CAP1YKL007W RPS17BP14127 136 aaKnown RBP4.27□□□□□ -1.73
CAP1YKL007W SPO11P23179 398 aa4.27□□□□□ -1.73
CAP1YKL007W SEC65P29478 273 aa4.27□□□□□ -1.73
CAP1YKL007W PPZ2P33329 710 aa4.27□□□□□ -1.73
CAP1YKL007W YPT53P36019 220 aa4.27□□□□□ -1.73
CAP1YKL007W DUN1P39009 513 aa4.27□□□□□ -1.73
CAP1YKL007W OAF1P39720 1047 aaPredicted RBP4.27□□□□□ -1.73
CAP1YKL007W YEL020CP39994 560 aa4.27□□□□□ -1.73
CAP1YKL007W KHA1P40309 873 aa4.27□□□□□ -1.73
CAP1YKL007W ATF1P40353 525 aa4.27□□□□□ -1.73
CAP1YKL007W ENP2P48234 707 aaKnown RBP4.27□□□□□ -1.73
CAP1YKL007W RFX1P48743 811 aa4.27□□□□□ -1.73
CAP1YKL007W NOP15P53927 220 aaPredicted RBP4.27□□□□□ -1.73
CAP1YKL007W NSE5Q03718 556 aa4.27□□□□□ -1.73
CAP1YKL007W YHM2Q04013 314 aa4.27□□□□□ -1.73
CAP1YKL007W HFI1Q12060 488 aa4.27□□□□□ -1.73
CAP1YKL007W SUT2Q12286 268 aa4.27□□□□□ -1.73
CAP1YKL007W NDJ1Q12366 352 aa4.27□□□□□ -1.73
CAP1YKL007W SET3P36124 751 aa4.26□□□□□ -1.73
CAP1YKL007W SPO1P53541 631 aa4.26□□□□□ -1.73
CAP1YKL007W YPS7Q06325 596 aa4.26□□□□□ -1.73
CAP1YKL007W OAF3P36023 863 aa4.25□□□□□ -1.73
CAP1YKL007W KSP1P38691 1029 aaKnown RBP4.25□□□□□ -1.73
CAP1YKL007W HXT6P39003 570 aaKnown RBP4.25□□□□□ -1.73
CAP1YKL007W HXT7P39004 570 aa4.25□□□□□ -1.73
CAP1YKL007W GPP1P41277 250 aaKnown RBP4.25□□□□□ -1.73
CAP1YKL007W BUD8P41698 603 aa4.25□□□□□ -1.73
CAP1YKL007W SPC98P53540 846 aa4.25□□□□□ -1.73
CAP1YKL007W RPS21BQ3E754 87 aaKnown RBP4.25□□□□□ -1.73
CAP1YKL007W IME1P21190 360 aa4.24□□□□□ -1.73
CAP1YKL007W ADY2P25613 283 aa4.24□□□□□ -1.73
CAP1YKL007W MUP3P38734 546 aa4.24□□□□□ -1.73
CAP1YKL007W RIX1P38883 763 aaPredicted RBP4.24□□□□□ -1.73
CAP1YKL007W THI6P41835 540 aa4.24□□□□□ -1.73
CAP1YKL007W IES1P43579 692 aa4.24□□□□□ -1.73
CAP1YKL007W TAF4P50105 388 aa4.24□□□□□ -1.73
CAP1YKL007W MRK1P50873 501 aa4.24□□□□□ -1.73
CAP1YKL007W GPG1P53130 126 aa4.24□□□□□ -1.73
CAP1YKL007W DAK1P54838 584 aaKnown RBP4.24□□□□□ -1.73
CAP1YKL007W RCR2Q03446 210 aaKnown RBP4.24□□□□□ -1.73
CAP1YKL007W CEF1Q03654 590 aaPredicted RBP4.24□□□□□ -1.73
CAP1YKL007W ARO10Q06408 635 aa4.24□□□□□ -1.73
CAP1YKL007W STP4Q07351 490 aa4.24□□□□□ -1.73
CAP1YKL007W MSS1P32559 526 aaPredicted RBP4.23□□□□□ -1.73
CAP1YKL007W YHR097CP38809 366 aaKnown RBP4.23□□□□□ -1.73
CAP1YKL007W NMA2P53204 395 aa4.23□□□□□ -1.73
CAP1YKL007W DIP5P53388 608 aa4.23□□□□□ -1.73
CAP1YKL007W FDC1Q03034 503 aa4.23□□□□□ -1.73
CAP1YKL007W NGL2Q03264 515 aaKnown RBP4.23□□□□□ -1.73
CAP1YKL007W HLR1Q04429 423 aa4.23□□□□□ -1.73
CAP1YKL007W UFO1Q04511 668 aa4.23□□□□□ -1.73
CAP1YKL007W SLK19Q08581 821 aaKnown RBP4.23□□□□□ -1.73
CAP1YKL007W RKI1Q12189 258 aa4.23□□□□□ -1.73
CAP1YKL007W ACO1P19414 778 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
CAP1YKL007W EMP70P32802 667 aa4.22□□□□□ -1.73
CAP1YKL007W PAC2P39937 518 aa4.22□□□□□ -1.73
CAP1YKL007W DUG1P43616 481 aaKnown RBP4.22□□□□□ -1.73
CAP1YKL007W YML122CQ03207 126 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms