RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRL1	YJL087C	YFL052W	P43551	465 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	TNA1	P53322	534 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	CUZ1	P53899	274 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	YKR011C	Q02209	353 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	YPL071C	Q02864	156 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	YDR131C	Q03899	556 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	MCH5	Q08777	521 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	YPL191C	Q08930	360 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	PGC1	Q08959	321 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	NHA1	Q99271	985 aa		2.26	□□□□□ -2.05
TRL1	YJL087C	NOT3	P06102	836 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	RED1	P14291	827 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	POL3	P15436	1097 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	DGR2	P32330	852 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	FRD1	P32614	470 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	MDL2	P33311	773 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YKL100C	P34248	587 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	MTH1	P35198	433 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	MAE1	P36013	669 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	BYE1	P36106	594 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	SET3	P36124	751 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	GPI8	P49018	411 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	HFM1	P51979	1187 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	MNT2	P53059	558 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	HOS2	P53096	452 aa	Predicted RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	YNR014W	P53719	212 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YNR071C	P53757	342 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	TIM50	Q02776	476 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	DOT1	Q04089	582 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	GIS4	Q04233	774 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YMR074C	Q04773	145 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	SNO4	Q04902	237 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	TRI1	Q05024	226 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YPS7	Q06325	596 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YPR196W	Q06595	470 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	XYL2	Q07993	356 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	HSP33	Q08914	237 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	YPL277C	Q08989	487 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	HSP32	Q08992	237 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YOR223W	Q12015	292 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	YOR022C	Q12204	715 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	PHM7	Q12252	991 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	DBP10	Q12389	995 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	PHO5	P00635	467 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	MIS1	P09440	975 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	RPL19A	P0CX82	189 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	RPL19B	P0CX83	189 aa	Predicted RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	SAC7	P17121	654 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	TRK2	P28584	889 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	RPD3	P32561	433 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	CTF13	P35203	478 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	SAP190	P36123	1033 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	ALT1	P52893	592 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	GPD1	Q00055	391 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	YMR155W	Q03795	547 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	CSR1	Q06705	408 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	SYT1	Q06836	1226 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	STP4	Q07351	490 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	PUS7	Q08647	676 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	HRK1	Q08732	759 aa	Known RBP	2.25	□□□□□ -2.05
TRL1	YJL087C	GPR1	Q12361	961 aa		2.25	□□□□□ -2.05
TRL1	YJL087C	PRC1	P00729	532 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	RPS17A	P02407	136 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	MET17	P06106	444 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	BIK1	P11709	440 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	RPS17B	P14127	136 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	BET2	P20133	325 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	IME1	P21190	360 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	SGF29	P25554	259 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	AAD3	P25612	363 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	BRF1	P29056	596 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	DPH2	P32461	534 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	YPT7	P32939	208 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	TYE7	P33122	291 aa	Predicted RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	RPT3	P33298	428 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	TAF5	P38129	798 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	YLF2	P38746	405 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	PIK1	P39104	1066 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	GID8	P40208	455 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	MEP1	P40260	492 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	SET2	P46995	733 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	BFA1	P47113	574 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	ATP22	P50273	684 aa	Predicted RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	ZDS2	P54786	942 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	CTF4	Q01454	927 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	SSL1	Q04673	461 aa	Predicted RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	MFB1	Q04922	465 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	OSW2	Q12202	724 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	ADE3	P07245	946 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	SAM35	P14693	329 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	ROX1	P25042	368 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	SWI4	P25302	1093 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	IMG2	P25642	146 aa	Predicted RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	GPT2	P36148	743 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	SRP72	P38688	640 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	RRF1	P38771	230 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	CCT3	P39077	534 aa	Known RBP	2.24	□□□□□ -2.05
TRL1	YJL087C	JEM1	P40358	645 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	LYS14	P40971	790 aa		2.24	□□□□□ -2.05
TRL1	YJL087C	PSP1	P50896	841 aa	Known RBP	2.24	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms