RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C ATP6P00854 259 aa3.62□□□□□ -1.83
SPT4YGR063C AI4P03878 556 aa3.62□□□□□ -1.83
SPT4YGR063C MPH3P0CE00 602 aa3.62□□□□□ -1.83
SPT4YGR063C MAK16P10962 306 aaPredicted RBP3.62□□□□□ -1.83
SPT4YGR063C FUS1P11710 512 aa3.62□□□□□ -1.83
SPT4YGR063C KAR1P11927 433 aa3.62□□□□□ -1.83
SPT4YGR063C HMG2P12684 1045 aa3.62□□□□□ -1.83
SPT4YGR063C ATR1P13090 542 aa3.62□□□□□ -1.83
SPT4YGR063C GFA1P14742 717 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C POL30P15873 258 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C TEC1P18412 486 aa3.62□□□□□ -1.83
SPT4YGR063C DIT2P21595 489 aa3.62□□□□□ -1.83
SPT4YGR063C SWI4P25302 1093 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C OCA4P25366 362 aa3.62□□□□□ -1.83
SPT4YGR063C CPR3P25719 182 aa3.62□□□□□ -1.83
SPT4YGR063C RPS5P26783 225 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C KIP2P28743 706 aa3.62□□□□□ -1.83
SPT4YGR063C ACH1P32316 526 aa3.62□□□□□ -1.83
SPT4YGR063C ACP1P32463 125 aa3.62□□□□□ -1.83
SPT4YGR063C HXT3P32466 567 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C PRP19P32523 503 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C XRS2P33301 854 aa3.62□□□□□ -1.83
SPT4YGR063C TFC4P33339 1025 aa3.62□□□□□ -1.83
SPT4YGR063C APL2P36000 726 aaPredicted RBP3.62□□□□□ -1.83
SPT4YGR063C GLG1P36143 616 aa3.62□□□□□ -1.83
SPT4YGR063C YKR078WP36158 585 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C ETR1P38071 380 aa3.62□□□□□ -1.83
SPT4YGR063C YBR032WP38223 100 aa3.62□□□□□ -1.83
SPT4YGR063C MIP6P38760 659 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C ERP5P38819 212 aa3.62□□□□□ -1.83
SPT4YGR063C MTG2P38860 518 aa3.62□□□□□ -1.83
SPT4YGR063C SEC31P38968 1273 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C MBP1P39678 833 aa3.62□□□□□ -1.83
SPT4YGR063C VHR2P40041 505 aa3.62□□□□□ -1.83
SPT4YGR063C AVT6P40074 448 aa3.62□□□□□ -1.83
SPT4YGR063C JLP2P40206 208 aa3.62□□□□□ -1.83
SPT4YGR063C QDR2P40474 542 aa3.62□□□□□ -1.83
SPT4YGR063C EMW1P42842 904 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C MNN11P46985 422 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C EFM5P53200 248 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C ARC35P53731 342 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C YNL115CP53925 644 aa3.62□□□□□ -1.83
SPT4YGR063C PRO2P54885 456 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C RPL22BP56628 122 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C CLU1Q03690 1277 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C NSE5Q03718 556 aa3.62□□□□□ -1.83
SPT4YGR063C FMN1Q03778 218 aa3.62□□□□□ -1.83
SPT4YGR063C SVF1Q05515 481 aa3.62□□□□□ -1.83
SPT4YGR063C GLO2Q05584 274 aa3.62□□□□□ -1.83
SPT4YGR063C ECI1Q05871 280 aa3.62□□□□□ -1.83
SPT4YGR063C JIP5Q06214 492 aaPredicted RBP3.62□□□□□ -1.83
SPT4YGR063C DIS3Q08162 1001 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C PUS7Q08647 676 aaKnown RBP3.62□□□□□ -1.83
SPT4YGR063C TRE1Q08919 783 aa3.62□□□□□ -1.83
SPT4YGR063C AFT2Q08957 416 aa3.62□□□□□ -1.83
SPT4YGR063C ATG29Q12092 213 aa3.62□□□□□ -1.83
SPT4YGR063C NCR1Q12200 1170 aa3.62□□□□□ -1.83
SPT4YGR063C TRM11Q12463 433 aa3.62□□□□□ -1.83
SPT4YGR063C SEM1O94742 89 aa3.61□□□□□ -1.83
SPT4YGR063C SIR3P06701 978 aa3.61□□□□□ -1.83
SPT4YGR063C PPR1P07272 904 aaPredicted RBP3.61□□□□□ -1.83
SPT4YGR063C MPH2P0CD99 609 aa3.61□□□□□ -1.83
SPT4YGR063C GPA2P10823 449 aa3.61□□□□□ -1.83
SPT4YGR063C RAP1P11938 827 aa3.61□□□□□ -1.83
SPT4YGR063C RGP1P16664 663 aa3.61□□□□□ -1.83
SPT4YGR063C PRP9P19736 530 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C OPI1P21957 404 aa3.61□□□□□ -1.83
SPT4YGR063C ATP12P22135 325 aa3.61□□□□□ -1.83
SPT4YGR063C ICL1P28240 557 aaPredicted RBP3.61□□□□□ -1.83
SPT4YGR063C SUV3P32580 737 aa3.61□□□□□ -1.83
SPT4YGR063C GYP6P32806 458 aa3.61□□□□□ -1.83
SPT4YGR063C PEP12P32854 288 aa3.61□□□□□ -1.83
SPT4YGR063C HES1P35843 434 aa3.61□□□□□ -1.83
SPT4YGR063C MYO3P36006 1272 aa3.61□□□□□ -1.83
SPT4YGR063C MIA40P36046 403 aa3.61□□□□□ -1.83
SPT4YGR063C NTR2P36118 322 aaPredicted RBP3.61□□□□□ -1.83
SPT4YGR063C NAT2P37293 288 aa3.61□□□□□ -1.83
SPT4YGR063C PPS1P38148 807 aa3.61□□□□□ -1.83
SPT4YGR063C GIP1P38229 639 aa3.61□□□□□ -1.83
SPT4YGR063C RFS1P38234 210 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C PFF1P38244 976 aa3.61□□□□□ -1.83
SPT4YGR063C OTU2P38747 307 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C RRF1P38771 230 aa3.61□□□□□ -1.83
SPT4YGR063C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SPT4YGR063C ELP2P42935 788 aa3.61□□□□□ -1.83
SPT4YGR063C BRE2P43132 505 aa3.61□□□□□ -1.83
SPT4YGR063C FAR7P43592 221 aa3.61□□□□□ -1.83
SPT4YGR063C IRC5P43610 853 aa3.61□□□□□ -1.83
SPT4YGR063C BNA3P47039 444 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C YJL049WP47048 450 aa3.61□□□□□ -1.83
SPT4YGR063C RPC17P47076 161 aa3.61□□□□□ -1.83
SPT4YGR063C YJR008WP47085 338 aa3.61□□□□□ -1.83
SPT4YGR063C YGR237CP50089 785 aa3.61□□□□□ -1.83
SPT4YGR063C PAN2P53010 1115 aaPredicted RBP3.61□□□□□ -1.83
SPT4YGR063C TAF6P53040 516 aa3.61□□□□□ -1.83
SPT4YGR063C NMA2P53204 395 aa3.61□□□□□ -1.83
SPT4YGR063C VAC7P53950 1165 aa3.61□□□□□ -1.83
SPT4YGR063C SLU7Q02775 382 aaKnown RBP3.61□□□□□ -1.83
SPT4YGR063C GCN5Q03330 439 aa3.61□□□□□ -1.83
SPT4YGR063C TAF12Q03761 539 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms