RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YNL034WP53963 612 aa7.04□□□□□ -1.28
MSP1YGR028W YNL018CP53976 612 aa7.04□□□□□ -1.28
MSP1YGR028W ZPS1Q12512 249 aa7.04□□□□□ -1.28
MSP1YGR028W UBR2Q07963 1872 aa7.04□□□□□ -1.28
MSP1YGR028W MOT1P32333 1867 aa7.03□□□□□ -1.28
MSP1YGR028W HEM13P11353 328 aaKnown RBP7.03□□□□□ -1.28
MSP1YGR028W RAD27P26793 382 aa7.03□□□□□ -1.28
MSP1YGR028W VID24P38263 362 aa7.03□□□□□ -1.28
MSP1YGR028W UBA2P52488 636 aa7.03□□□□□ -1.28
MSP1YGR028W MNP1P53163 194 aaPredicted RBP7.03□□□□□ -1.28
MSP1YGR028W YNL146WP53906 100 aa7.03□□□□□ -1.28
MSP1YGR028W FUS2Q05670 677 aa7.03□□□□□ -1.28
MSP1YGR028W MMR1Q06324 491 aa7.03□□□□□ -1.28
MSP1YGR028W HDA2Q06629 674 aa7.03□□□□□ -1.28
MSP1YGR028W IES4Q08561 116 aa7.03□□□□□ -1.28
MSP1YGR028W HRK1Q08732 759 aaKnown RBP7.03□□□□□ -1.28
MSP1YGR028W RTT10Q08924 1013 aa7.03□□□□□ -1.28
MSP1YGR028W TMA46Q12000 345 aaKnown RBP7.03□□□□□ -1.28
MSP1YGR028W YOR022CQ12204 715 aa7.03□□□□□ -1.28
MSP1YGR028W COX4P04037 155 aa7.02□□□□□ -1.29
MSP1YGR028W TOM70P07213 617 aaKnown RBP7.02□□□□□ -1.29
MSP1YGR028W PFK1P16861 987 aaKnown RBP7.02□□□□□ -1.29
MSP1YGR028W URA1P28272 314 aaPredicted RBP7.02□□□□□ -1.29
MSP1YGR028W PEX2P32800 271 aa7.02□□□□□ -1.29
MSP1YGR028W PET112P33893 541 aa7.02□□□□□ -1.29
MSP1YGR028W GCS1P35197 352 aa7.02□□□□□ -1.29
MSP1YGR028W RFS1P38234 210 aaKnown RBP7.02□□□□□ -1.29
MSP1YGR028W BUD16P39988 312 aa7.02□□□□□ -1.29
MSP1YGR028W OYE3P41816 400 aaPredicted RBP7.02□□□□□ -1.29
MSP1YGR028W NPA3P47122 385 aa7.02□□□□□ -1.29
MSP1YGR028W VID30P53076 958 aa7.02□□□□□ -1.29
MSP1YGR028W YGR130CP53278 816 aa7.02□□□□□ -1.29
MSP1YGR028W TOF1P53840 1238 aa7.02□□□□□ -1.29
MSP1YGR028W RTC4P53850 401 aa7.02□□□□□ -1.29
MSP1YGR028W LCD1Q04377 747 aa7.02□□□□□ -1.29
MSP1YGR028W RSA3Q05942 220 aaKnown RBP7.02□□□□□ -1.29
MSP1YGR028W MRL1Q06815 381 aa7.02□□□□□ -1.29
MSP1YGR028W YPL150WQ12152 901 aa7.02□□□□□ -1.29
MSP1YGR028W GCR1P07261 785 aa7.01□□□□□ -1.29
MSP1YGR028W COT1P32798 439 aa7.01□□□□□ -1.29
MSP1YGR028W MAL33P38157 468 aa7.01□□□□□ -1.29
MSP1YGR028W YIR016WP40572 265 aa7.01□□□□□ -1.29
MSP1YGR028W YFL052WP43551 465 aa7.01□□□□□ -1.29
MSP1YGR028W CUL3P53202 744 aa7.01□□□□□ -1.29
MSP1YGR028W YLR257WQ06146 321 aaKnown RBP7.01□□□□□ -1.29
MSP1YGR028W OSW2Q12202 724 aa7.01□□□□□ -1.29
MSP1YGR028W CYC7P00045 113 aa7□□□□□ -1.29
MSP1YGR028W CIT2P08679 460 aa7□□□□□ -1.29
MSP1YGR028W POL3P15436 1097 aa7□□□□□ -1.29
MSP1YGR028W GLN3P18494 730 aa7□□□□□ -1.29
MSP1YGR028W SSD1P24276 1250 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
MSP1YGR028W SEC21P32074 935 aaKnown RBP7□□□□□ -1.29
MSP1YGR028W DPH2P32461 534 aa7□□□□□ -1.29
MSP1YGR028W PRX1P34227 261 aaKnown RBP7□□□□□ -1.29
MSP1YGR028W CCL1P37366 393 aa7□□□□□ -1.29
MSP1YGR028W PPS1P38148 807 aa7□□□□□ -1.29
MSP1YGR028W STB5P38699 743 aa7□□□□□ -1.29
MSP1YGR028W QNS1P38795 714 aaKnown RBP7□□□□□ -1.29
MSP1YGR028W YAP1801P38856 637 aa7□□□□□ -1.29
MSP1YGR028W ENV11P53246 860 aa7□□□□□ -1.29
MSP1YGR028W YNR063WP53749 607 aa7□□□□□ -1.29
MSP1YGR028W HIS4P00815 799 aaKnown RBP6.99□□□□□ -1.29
MSP1YGR028W TRP3P00937 484 aa6.99□□□□□ -1.29
MSP1YGR028W RPL4AP10664 362 aaKnown RBP6.99□□□□□ -1.29
MSP1YGR028W PGI1P12709 554 aaKnown RBP6.99□□□□□ -1.29
MSP1YGR028W CKA2P19454 339 aa6.99□□□□□ -1.29
MSP1YGR028W CLN2P20438 545 aa6.99□□□□□ -1.29
MSP1YGR028W ISY1P21374 235 aaPredicted RBP6.99□□□□□ -1.29
MSP1YGR028W PEX1P24004 1043 aa6.99□□□□□ -1.29
MSP1YGR028W RPC53P25441 422 aa6.99□□□□□ -1.29
MSP1YGR028W RDS1P25611 832 aa6.99□□□□□ -1.29
MSP1YGR028W SYN8P31377 255 aa6.99□□□□□ -1.29
MSP1YGR028W BUD2P33314 1104 aa6.99□□□□□ -1.29
MSP1YGR028W HEL1P36113 551 aa6.99□□□□□ -1.29
MSP1YGR028W MRPL7P36519 292 aa6.99□□□□□ -1.29
MSP1YGR028W CCC2P38995 1004 aa6.99□□□□□ -1.29
MSP1YGR028W NUP82P40368 713 aa6.99□□□□□ -1.29
MSP1YGR028W GNP1P48813 663 aa6.99□□□□□ -1.29
MSP1YGR028W RPL4BP49626 362 aaKnown RBP6.99□□□□□ -1.29
MSP1YGR028W TAM41P53230 385 aa6.99□□□□□ -1.29
MSP1YGR028W CAF130P53280 1122 aaPredicted RBP6.99□□□□□ -1.29
MSP1YGR028W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
MSP1YGR028W TRS130Q03660 1102 aa6.99□□□□□ -1.29
MSP1YGR028W COG8Q04632 607 aa6.99□□□□□ -1.29
MSP1YGR028W YDL057WQ07379 328 aa6.99□□□□□ -1.29
MSP1YGR028W SHS1Q07657 551 aa6.99□□□□□ -1.29
MSP1YGR028W PSR2Q07949 397 aa6.99□□□□□ -1.29
MSP1YGR028W PUS7Q08647 676 aaKnown RBP6.99□□□□□ -1.29
MSP1YGR028W PKH2Q12236 1081 aaKnown RBP6.99□□□□□ -1.29
MSP1YGR028W RSA4P25382 515 aaKnown RBP6.98□□□□□ -1.29
MSP1YGR028W OMA1P36163 345 aa6.98□□□□□ -1.29
MSP1YGR028W PCM1P38628 557 aaKnown RBP6.98□□□□□ -1.29
MSP1YGR028W YHR202WP38887 602 aa6.98□□□□□ -1.29
MSP1YGR028W MAF1P41910 395 aa6.98□□□□□ -1.29
MSP1YGR028W STB4P50104 949 aa6.98□□□□□ -1.29
MSP1YGR028W ORC5P50874 479 aa6.98□□□□□ -1.29
MSP1YGR028W TPP1Q03796 238 aa6.98□□□□□ -1.29
MSP1YGR028W ESC8Q08119 714 aa6.98□□□□□ -1.29
MSP1YGR028W TOR2P32600 2474 aaKnown RBP6.98□□□□□ -1.29
MSP1YGR028W MBR1P23493 339 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms