RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	KAR3	P17119	729 aa		10.65	□□□□□ -0.7
RET2	YFR051C	RAD16	P31244	790 aa		10.65	□□□□□ -0.7
RET2	YFR051C	MRP4	P32902	394 aa		10.65	□□□□□ -0.7
RET2	YFR051C	ABZ1	P37254	787 aa	Predicted RBP	10.65	□□□□□ -0.7
RET2	YFR051C	TDA3	P38758	523 aa		10.65	□□□□□ -0.7
RET2	YFR051C	YMR124W	P39523	943 aa	Known RBP	10.65	□□□□□ -0.7
RET2	YFR051C	AVT2	P39981	480 aa		10.65	□□□□□ -0.7
RET2	YFR051C	STU2	P46675	888 aa		10.65	□□□□□ -0.7
RET2	YFR051C	PSP1	P50896	841 aa	Known RBP	10.65	□□□□□ -0.7
RET2	YFR051C	PUS2	P53167	370 aa		10.65	□□□□□ -0.7
RET2	YFR051C	CEG1	Q01159	459 aa	Predicted RBP	10.65	□□□□□ -0.7
RET2	YFR051C	YCG1	Q06680	1035 aa		10.65	□□□□□ -0.7
RET2	YFR051C	DIS3	Q08162	1001 aa	Known RBP	10.65	□□□□□ -0.7
RET2	YFR051C	RAD59	Q12223	238 aa		10.65	□□□□□ -0.7
RET2	YFR051C	IMG2	P25642	146 aa	Predicted RBP	10.64	□□□□□ -0.71
RET2	YFR051C	PPZ1	P26570	692 aa		10.64	□□□□□ -0.71
RET2	YFR051C	DAL1	P32375	460 aa		10.64	□□□□□ -0.71
RET2	YFR051C	MFT1	P33441	392 aa	Known RBP	10.64	□□□□□ -0.71
RET2	YFR051C	COY1	P34237	679 aa		10.64	□□□□□ -0.71
RET2	YFR051C	OSW7	P43611	510 aa		10.64	□□□□□ -0.71
RET2	YFR051C	YGR111W	P53265	400 aa		10.64	□□□□□ -0.71
RET2	YFR051C	LEE1	Q02799	301 aa	Known RBP	10.64	□□□□□ -0.71
RET2	YFR051C	TAF9	Q05027	157 aa		10.64	□□□□□ -0.71
RET2	YFR051C	APC5	Q08683	685 aa		10.64	□□□□□ -0.71
RET2	YFR051C	NDJ1	Q12366	352 aa		10.64	□□□□□ -0.71
RET2	YFR051C	BET2	P20133	325 aa		10.63	□□□□□ -0.71
RET2	YFR051C	AEP2	P22136	580 aa		10.63	□□□□□ -0.71
RET2	YFR051C	DSS4	P32601	143 aa		10.63	□□□□□ -0.71
RET2	YFR051C	BCH2	P36122	765 aa		10.63	□□□□□ -0.71
RET2	YFR051C	FHL1	P39521	936 aa		10.63	□□□□□ -0.71
RET2	YFR051C	YDR222W	Q04925	415 aa		10.63	□□□□□ -0.71
RET2	YFR051C	HRD3	Q05787	833 aa		10.63	□□□□□ -0.71
RET2	YFR051C	VPS38	Q05919	439 aa		10.63	□□□□□ -0.71
RET2	YFR051C	ECM22	Q05958	814 aa	Predicted RBP	10.63	□□□□□ -0.71
RET2	YFR051C	BI2	P03873	423 aa		10.62	□□□□□ -0.71
RET2	YFR051C	BI4	P03879	638 aa		10.62	□□□□□ -0.71
RET2	YFR051C	KEX2	P13134	814 aa		10.62	□□□□□ -0.71
RET2	YFR051C	RAM1	P22007	431 aa		10.62	□□□□□ -0.71
RET2	YFR051C	SPC110	P32380	944 aa		10.62	□□□□□ -0.71
RET2	YFR051C	RIM101	P33400	625 aa		10.62	□□□□□ -0.71
RET2	YFR051C	DUG2	P38149	878 aa		10.62	□□□□□ -0.71
RET2	YFR051C	PSY2	P40164	858 aa		10.62	□□□□□ -0.71
RET2	YFR051C	LSB6	P42951	607 aa		10.62	□□□□□ -0.71
RET2	YFR051C	YNR014W	P53719	212 aa		10.62	□□□□□ -0.71
RET2	YFR051C	PML39	Q03760	334 aa		10.62	□□□□□ -0.71
RET2	YFR051C	YPQ1	Q12010	308 aa		10.62	□□□□□ -0.71
RET2	YFR051C	BI3	Q9ZZW7	517 aa		10.62	□□□□□ -0.71
RET2	YFR051C	MTF1	P14908	341 aa	Known RBP	10.62	□□□□□ -0.71
RET2	YFR051C	YBR225W	P38321	900 aa		10.62	□□□□□ -0.71
RET2	YFR051C	NUP60	P39705	539 aa		10.62	□□□□□ -0.71
RET2	YFR051C	YGR021W	P53212	290 aa		10.62	□□□□□ -0.71
RET2	YFR051C	GYL1	Q04322	720 aa		10.62	□□□□□ -0.71
RET2	YFR051C	YDR344C	Q05510	147 aa		10.62	□□□□□ -0.71
RET2	YFR051C	RGR1	P19263	1082 aa		10.61	□□□□□ -0.71
RET2	YFR051C	SRB2	P34162	210 aa		10.61	□□□□□ -0.71
RET2	YFR051C	SSP1	P38871	571 aa		10.61	□□□□□ -0.71
RET2	YFR051C	SNZ3	P43545	298 aa		10.61	□□□□□ -0.71
RET2	YFR051C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.61	□□□□□ -0.71	not detected
RET2	YFR051C	SNZ2	P53824	298 aa		10.61	□□□□□ -0.71
RET2	YFR051C	SYH1	Q02875	849 aa	Known RBP	10.61	□□□□□ -0.71
RET2	YFR051C	AIM39	Q08223	395 aa		10.61	□□□□□ -0.71
RET2	YFR051C	SEC1	P30619	724 aa	Known RBP	10.6	□□□□□ -0.71
RET2	YFR051C	PCH2	P38126	564 aa		10.6	□□□□□ -0.71
RET2	YFR051C	NCL1	P38205	684 aa	Known RBP	10.6	□□□□□ -0.71
RET2	YFR051C	SET5	P38890	526 aa	Known RBP	10.6	□□□□□ -0.71
RET2	YFR051C	YPL062W	Q02781	134 aa		10.6	□□□□□ -0.71
RET2	YFR051C	YMR018W	Q04364	514 aa		10.6	□□□□□ -0.71
RET2	YFR051C	SPG3	Q04398	127 aa	Predicted RBP	10.6	□□□□□ -0.71
RET2	YFR051C	BSP1	Q06604	576 aa		10.6	□□□□□ -0.71
RET2	YFR051C	THI20	Q08224	551 aa		10.6	□□□□□ -0.71
RET2	YFR051C	PUP3	P25451	205 aa	Known RBP	10.59	□□□□□ -0.71
RET2	YFR051C	YKL097C	P34245	136 aa		10.59	□□□□□ -0.71
RET2	YFR051C	YBR053C	P38235	358 aa		10.59	□□□□□ -0.71
RET2	YFR051C	HSL7	P38274	827 aa		10.59	□□□□□ -0.71
RET2	YFR051C	JJJ1	P53863	590 aa		10.59	□□□□□ -0.71
RET2	YFR051C	ESC2	Q06340	456 aa		10.59	□□□□□ -0.71
RET2	YFR051C	CCH1	P50077	2039 aa		10.59	□□□□□ -0.71
RET2	YFR051C	SEG2	P34250	1132 aa		10.58	□□□□□ -0.72
RET2	YFR051C	DSF2	P38213	736 aa		10.58	□□□□□ -0.72
RET2	YFR051C	PRK1	P40494	810 aa		10.58	□□□□□ -0.72
RET2	YFR051C	SOV1	Q04748	898 aa		10.58	□□□□□ -0.72
RET2	YFR051C	YLR001C	Q07895	862 aa		10.58	□□□□□ -0.72
RET2	YFR051C	YRR1	Q12172	810 aa		10.58	□□□□□ -0.72
RET2	YFR051C	VPS5	Q92331	675 aa		10.58	□□□□□ -0.72
RET2	YFR051C	PUT4	P15380	627 aa		10.58	□□□□□ -0.72
RET2	YFR051C	STE11	P23561	717 aa		10.58	□□□□□ -0.72
RET2	YFR051C	RAD57	P25301	460 aa		10.58	□□□□□ -0.72
RET2	YFR051C	HSP78	P33416	811 aa		10.58	□□□□□ -0.72
RET2	YFR051C	TMN3	P40071	706 aa		10.58	□□□□□ -0.72
RET2	YFR051C	YER189W	P40104	122 aa		10.58	□□□□□ -0.72
RET2	YFR051C	SAP185	P40856	1058 aa		10.58	□□□□□ -0.72
RET2	YFR051C	ALF1	P53904	254 aa		10.58	□□□□□ -0.72
RET2	YFR051C	SXM1	Q04175	944 aa	Known RBP	10.58	□□□□□ -0.72
RET2	YFR051C	ERV41	Q04651	352 aa		10.58	□□□□□ -0.72
RET2	YFR051C	DAS2	Q12084	232 aa		10.58	□□□□□ -0.72
RET2	YFR051C	ARP7	Q12406	477 aa		10.58	□□□□□ -0.72
RET2	YFR051C	SIR1	P21691	654 aa		10.57	□□□□□ -0.72
RET2	YFR051C	PPH22	P23595	377 aa		10.57	□□□□□ -0.72
RET2	YFR051C	SGF29	P25554	259 aa		10.57	□□□□□ -0.72
RET2	YFR051C	ISF1	P32488	338 aa		10.57	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms