RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	TRM5	P38793	499 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	ALB1	P47019	175 aa	Predicted RBP	5.65	□□□□□ -1.51
VTC2	YFL004W	BNA3	P47039	444 aa	Known RBP	5.65	□□□□□ -1.51
VTC2	YFL004W	DAN4	P47179	1161 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	SYH1	Q02875	849 aa	Known RBP	5.65	□□□□□ -1.51
VTC2	YFL004W	RAD30	Q04049	632 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	SOG2	Q08817	791 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	VCX1	Q99385	411 aa		5.65	□□□□□ -1.51
VTC2	YFL004W	ARG82	P07250	355 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	HSF1	P10961	833 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	KGD2	P19262	463 aa	Predicted RBP	5.64	□□□□□ -1.51
VTC2	YFL004W	GPI10	P30777	616 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	PEP7	P32609	515 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	SEC6	P32844	805 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	TRM2	P33753	639 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
VTC2	YFL004W	OAF1	P39720	1047 aa	Predicted RBP	5.64	□□□□□ -1.51
VTC2	YFL004W	RLP7	P40693	322 aa	Known RBP	5.64	□□□□□ -1.51
VTC2	YFL004W	SPC105	P53148	917 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	RPL22B	P56628	122 aa	Known RBP	5.64	□□□□□ -1.51
VTC2	YFL004W	UBP16	Q02863	499 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	YDR476C	Q03362	224 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	KAR5	Q04746	504 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	TFC6	Q06339	672 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	GPI13	Q07830	1017 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	PPM2	Q08282	695 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	TFB4	Q12004	338 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	ATP16	Q12165	160 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	NTO1	Q12311	748 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	SPO16	P17122	198 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	EXO70	P19658	623 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	HSP60	P19882	572 aa	Known RBP	5.64	□□□□□ -1.51
VTC2	YFL004W	EUG1	P32474	517 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	MAM33	P40513	266 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	SET4	P42948	560 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	FAR7	P43592	221 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	GNP1	P48813	663 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	MEC3	Q02574	474 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	GIS4	Q04233	774 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	YPR109W	Q06104	294 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	TMA46	Q12000	345 aa	Known RBP	5.64	□□□□□ -1.51
VTC2	YFL004W	MNL2	Q12205	849 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	CEX1	Q12453	761 aa		5.64	□□□□□ -1.51
VTC2	YFL004W	YLR462W	O13556	202 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	SEN2	P16658	377 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	TSR4	P25040	408 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	IFA38	P38286	347 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	YHL049C	P38722	271 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	YEL075C	P39972	122 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	YER189W	P40104	122 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	YFL064C	P43540	174 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	GCD14	P46959	383 aa	Predicted RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	PSP2	P50109	593 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	PSP1	P50896	841 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	ASI2	P53895	289 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	HDA1	P53973	706 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	MTG1	Q03151	367 aa	Predicted RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	FCP1	Q03254	732 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	SYO1	Q07395	620 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	SNX3	Q08826	162 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	YBL111C	Q3E7Y5	667 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	TUB1	P09733	447 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	HEM15	P16622	393 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	DBP5	P20449	482 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	ESS1	P22696	170 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	RRT12	P25381	491 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	HXT3	P32466	567 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	TRF5	P48561	642 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	YNL108C	P53929	270 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	ABZ2	Q03266	374 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	COX20	Q04935	205 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	BCP1	Q06338	283 aa		5.63	□□□□□ -1.51
VTC2	YFL004W	INP54	Q08227	384 aa	Known RBP	5.63	□□□□□ -1.51
VTC2	YFL004W	LEU1	P07264	779 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	KIN2	P13186	1147 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	CAD1	P24813	409 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	MEF1	P25039	761 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	LCB1	P25045	558 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	ICL1	P28240	557 aa	Predicted RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	DGR2	P32330	852 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	PRP40	P33203	583 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	CUE2	P36075	443 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	SWC5	P38326	303 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	TSC10	P38342	320 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	APE4	P38821	490 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	IES5	P40060	125 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	FMP32	P43557	207 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	TY4A-J	P47023	414 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	PTK2	P47116	818 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	UBA2	P52488	636 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	DAK1	P54838	584 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	ULP1	Q02724	621 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	YMR018W	Q04364	514 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	DCS1	Q06151	350 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	TOS4	Q06266	489 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	YEH2	Q07950	538 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	NPP1	P25353	742 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	HEM3	P28789	327 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	TFC4	P33339	1025 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	BLI1	P35727	113 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms