RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	CTP1	P38152	299 aa		5.04	□□□□□ -1.6
YEA4	YEL004W	DOT6	P40059	670 aa	Known RBP	5.04	□□□□□ -1.6
YEA4	YEL004W	BNA3	P47039	444 aa	Known RBP	5.04	□□□□□ -1.6
YEA4	YEL004W	SLK19	Q08581	821 aa	Known RBP	5.04	□□□□□ -1.6
YEA4	YEL004W	BMS1	Q08965	1183 aa	Known RBP	5.04	□□□□□ -1.6
YEA4	YEL004W	DCS2	Q12123	353 aa		5.04	□□□□□ -1.6
YEA4	YEL004W	PCL2	P25693	308 aa		5.03	□□□□□ -1.6
YEA4	YEL004W	YHR202W	P38887	602 aa		5.03	□□□□□ -1.6
YEA4	YEL004W	SEC5	P89102	971 aa		5.03	□□□□□ -1.6
YEA4	YEL004W	HFD1	Q04458	532 aa		5.03	□□□□□ -1.6
YEA4	YEL004W	RKI1	Q12189	258 aa		5.03	□□□□□ -1.6
YEA4	YEL004W	NUP1	P20676	1076 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	YPT7	P32939	208 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	PCM1	P38628	557 aa	Known RBP	5.02	□□□□□ -1.61
YEA4	YEL004W	GAT1	P43574	510 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	YJR039W	P47107	1121 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	SNF12	P53628	566 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	COG8	Q04632	607 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	POB3	Q04636	552 aa	Known RBP	5.02	□□□□□ -1.61
YEA4	YEL004W	POM34	Q12445	299 aa		5.02	□□□□□ -1.61
YEA4	YEL004W	ADE5,7	P07244	802 aa	Known RBP	5.01	□□□□□ -1.61
YEA4	YEL004W	UGP1	P32861	499 aa	Known RBP	5.01	□□□□□ -1.61
YEA4	YEL004W	YEL1	P34225	687 aa		5.01	□□□□□ -1.61
YEA4	YEL004W	NUG1	P40010	520 aa	Known RBP	5.01	□□□□□ -1.61
YEA4	YEL004W	PMT6	P42934	759 aa		5.01	□□□□□ -1.61
YEA4	YEL004W	TAX4	P47030	604 aa		5.01	□□□□□ -1.61
YEA4	YEL004W	YSH1	Q06224	779 aa	Predicted RBP	5.01	□□□□□ -1.61
YEA4	YEL004W	PGK1	P00560	416 aa	Known RBP	5	□□□□□ -1.61
YEA4	YEL004W	XBP1	P40489	647 aa		5	□□□□□ -1.61
YEA4	YEL004W	DIP5	P53388	608 aa		5	□□□□□ -1.61
YEA4	YEL004W	YFT2	Q06676	274 aa		5	□□□□□ -1.61
YEA4	YEL004W	ULA1	Q12059	462 aa		5	□□□□□ -1.61
YEA4	YEL004W	SFL1	P20134	766 aa		4.99	□□□□□ -1.61
YEA4	YEL004W	COS111	P38308	924 aa		4.99	□□□□□ -1.61
YEA4	YEL004W	NTG2	Q08214	380 aa		4.99	□□□□□ -1.61
YEA4	YEL004W	GIN4	Q12263	1142 aa		4.99	□□□□□ -1.61
YEA4	YEL004W	MDM20	Q12387	796 aa	Known RBP	4.99	□□□□□ -1.61
YEA4	YEL004W	TPK2	P06245	380 aa		4.98	□□□□□ -1.61
YEA4	YEL004W	PTP1	P25044	335 aa		4.98	□□□□□ -1.61
YEA4	YEL004W	APL3	P38065	1025 aa		4.98	□□□□□ -1.61
YEA4	YEL004W	BIT61	P47041	543 aa		4.98	□□□□□ -1.61
YEA4	YEL004W	ORC1	P54784	914 aa	Predicted RBP	4.98	□□□□□ -1.61
YEA4	YEL004W	RCR2	Q03446	210 aa	Known RBP	4.98	□□□□□ -1.61
YEA4	YEL004W	YDR179W-A	Q03983	463 aa		4.98	□□□□□ -1.61
YEA4	YEL004W	YTA7	P40340	1379 aa		4.97	□□□□□ -1.61
YEA4	YEL004W	ERG20	P08524	352 aa	Known RBP	4.97	□□□□□ -1.61
YEA4	YEL004W	FRS1	P15624	595 aa	Known RBP	4.97	□□□□□ -1.61
YEA4	YEL004W	IMG2	P25642	146 aa	Predicted RBP	4.97	□□□□□ -1.61
YEA4	YEL004W	ELF1	P36053	145 aa		4.97	□□□□□ -1.61
YEA4	YEL004W	NET1	P47035	1189 aa		4.97	□□□□□ -1.61
YEA4	YEL004W	FPR4	Q06205	392 aa	Predicted RBP	4.97	□□□□□ -1.61
YEA4	YEL004W	VHS3	Q08438	674 aa		4.97	□□□□□ -1.61
YEA4	YEL004W	APN1	P22936	367 aa		4.96	□□□□□ -1.62
YEA4	YEL004W	MBR1	P23493	339 aa		4.96	□□□□□ -1.62
YEA4	YEL004W	BEM4	P39011	633 aa		4.96	□□□□□ -1.62
YEA4	YEL004W	LTP1	P40347	161 aa		4.96	□□□□□ -1.62
YEA4	YEL004W	ARG7	Q04728	441 aa		4.96	□□□□□ -1.62
YEA4	YEL004W	IZH3	Q07959	543 aa		4.96	□□□□□ -1.62
YEA4	YEL004W	GPD1	Q00055	391 aa	Known RBP	4.95	□□□□□ -1.62
YEA4	YEL004W	UFO1	Q04511	668 aa		4.95	□□□□□ -1.62
YEA4	YEL004W	YLR001C	Q07895	862 aa		4.95	□□□□□ -1.62
YEA4	YEL004W	RGT2	Q12300	763 aa		4.95	□□□□□ -1.62
YEA4	YEL004W	STE4	P18851	423 aa		4.94	□□□□□ -1.62
YEA4	YEL004W	NTH1	P32356	751 aa		4.94	□□□□□ -1.62
YEA4	YEL004W	PET127	P32606	800 aa		4.94	□□□□□ -1.62
YEA4	YEL004W	HOT13	P36078	116 aa		4.94	□□□□□ -1.62
YEA4	YEL004W	RPS9B	P05755	195 aa	Known RBP	4.93	□□□□□ -1.62
YEA4	YEL004W	KIN82	P25341	720 aa		4.93	□□□□□ -1.62
YEA4	YEL004W	PIP2	P52960	996 aa		4.93	□□□□□ -1.62
YEA4	YEL004W	MET13	P53128	600 aa		4.93	□□□□□ -1.62
YEA4	YEL004W	NGL2	Q03264	515 aa	Known RBP	4.93	□□□□□ -1.62
YEA4	YEL004W	SEC15	P22224	910 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	AAD3	P25612	363 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	YKU70	P32807	602 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	CCT5	P40413	562 aa	Known RBP	4.92	□□□□□ -1.62
YEA4	YEL004W	YGL117W	P53133	265 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	TFB2	Q02939	513 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	TRS23	Q03784	219 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	YLR407W	Q06070	228 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	YPS7	Q06325	596 aa		4.92	□□□□□ -1.62
YEA4	YEL004W	LEU2	P04173	364 aa	Predicted RBP	4.91	□□□□□ -1.62
YEA4	YEL004W	IME1	P21190	360 aa		4.91	□□□□□ -1.62
YEA4	YEL004W	YNL193W	P53870	558 aa		4.91	□□□□□ -1.62
YEA4	YEL004W	VBA4	Q04602	768 aa	Known RBP	4.91	□□□□□ -1.62
YEA4	YEL004W	GUD1	Q07729	489 aa		4.91	□□□□□ -1.62
YEA4	YEL004W	AI5_ALPHA	Q9ZZX1	630 aa		4.91	□□□□□ -1.62
YEA4	YEL004W	RRP14	P36080	434 aa	Known RBP	4.9	□□□□□ -1.63
YEA4	YEL004W	MAL31	P38156	614 aa		4.9	□□□□□ -1.63
YEA4	YEL004W	PPG1	P32838	368 aa		4.89	□□□□□ -1.63
YEA4	YEL004W	BUD8	P41698	603 aa		4.89	□□□□□ -1.63
YEA4	YEL004W	RNH70	P53331	553 aa		4.89	□□□□□ -1.63
YEA4	YEL004W	YKR075C	P36155	307 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	TMN3	P40071	706 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	SCS3	P53012	380 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	CPR8	P53728	308 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	YMR210W	Q03649	449 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	CIR2	Q08822	631 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	FRE7	Q12333	620 aa		4.88	□□□□□ -1.63
YEA4	YEL004W	SFP1	P32432	683 aa		4.87	□□□□□ -1.63
YEA4	YEL004W	ALG12	P53730	551 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms