RNA–Protein interactions for RNA: YDR398W

UTP5, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP5, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP5	YDR398W	IME1	P21190	360 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	DID4	P36108	232 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	ARG2	P40360	574 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	NOP15	P53927	220 aa	Predicted RBP	4.58	□□□□□ -1.68
UTP5	YDR398W	YHM2	Q04013	314 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	VBA4	Q04602	768 aa	Known RBP	4.58	□□□□□ -1.68
UTP5	YDR398W	CHS5	Q12114	671 aa	Known RBP	4.58	□□□□□ -1.68
UTP5	YDR398W	RPS17A	P02407	136 aa	Known RBP	4.58	□□□□□ -1.68
UTP5	YDR398W	RPS17B	P14127	136 aa	Known RBP	4.58	□□□□□ -1.68
UTP5	YDR398W	KIN82	P25341	720 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	FEN2	P25621	512 aa	Known RBP	4.58	□□□□□ -1.68
UTP5	YDR398W	ATG4	P53867	494 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	USV1	Q12132	391 aa		4.58	□□□□□ -1.68
UTP5	YDR398W	CDC43	P18898	376 aa		4.57	□□□□□ -1.68
UTP5	YDR398W	KIN3	P22209	435 aa		4.57	□□□□□ -1.68
UTP5	YDR398W	GRX4	P32642	244 aa		4.57	□□□□□ -1.68
UTP5	YDR398W	PTA1	Q01329	785 aa	Predicted RBP	4.57	□□□□□ -1.68
UTP5	YDR398W	STP4	Q07351	490 aa		4.57	□□□□□ -1.68
UTP5	YDR398W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
UTP5	YDR398W	RPS9B	P05755	195 aa	Known RBP	4.56	□□□□□ -1.68
UTP5	YDR398W	RPS21A	P0C0V8	87 aa	Known RBP	4.56	□□□□□ -1.68
UTP5	YDR398W	SEC15	P22224	910 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	UBS1	P38290	277 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	YJL206C	P39529	758 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	YEN1	P40028	759 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	YIL077C	P40508	320 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	CCT7	P42943	550 aa	Known RBP	4.56	□□□□□ -1.68
UTP5	YDR398W	IES1	P43579	692 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	RFX1	P48743	811 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	TAF3	Q12297	353 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	TAD3	Q9URQ3	322 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	PRP22	P24384	1145 aa	Known RBP	4.56	□□□□□ -1.68
UTP5	YDR398W	SET3	P36124	751 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	FAT1	P38225	669 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	BDH2	P39713	417 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	BUD8	P41698	603 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	PXA1	P41909	870 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	CTR1	P49573	406 aa		4.56	□□□□□ -1.68
UTP5	YDR398W	GLN4	P13188	809 aa	Known RBP	4.55	□□□□□ -1.68
UTP5	YDR398W	GLG1	P36143	616 aa		4.55	□□□□□ -1.68
UTP5	YDR398W	COS111	P38308	924 aa		4.55	□□□□□ -1.68
UTP5	YDR398W	DUN1	P39009	513 aa		4.55	□□□□□ -1.68
UTP5	YDR398W	MPS3	P47069	682 aa		4.55	□□□□□ -1.68
UTP5	YDR398W	PPN1	Q04119	674 aa		4.55	□□□□□ -1.68
UTP5	YDR398W	YFT2	Q06676	274 aa		4.55	□□□□□ -1.68
UTP5	YDR398W	ABF1	P14164	731 aa		4.54	□□□□□ -1.68
UTP5	YDR398W	GFA1	P14742	717 aa	Known RBP	4.54	□□□□□ -1.68
UTP5	YDR398W	DMC1	P25453	334 aa		4.54	□□□□□ -1.68
UTP5	YDR398W	VPS73	P53142	486 aa	Known RBP	4.54	□□□□□ -1.68
UTP5	YDR398W	CTP1	P38152	299 aa		4.54	□□□□□ -1.68
UTP5	YDR398W	TDP1	P38319	544 aa		4.54	□□□□□ -1.68
UTP5	YDR398W	YGR151C	P53287	111 aa		4.54	□□□□□ -1.68
UTP5	YDR398W	SPO1	P53541	631 aa		4.54	□□□□□ -1.68
UTP5	YDR398W	NTH1	P32356	751 aa		4.53	□□□□□ -1.68
UTP5	YDR398W	MSS1	P32559	526 aa	Predicted RBP	4.53	□□□□□ -1.68
UTP5	YDR398W	KHA1	P40309	873 aa		4.53	□□□□□ -1.68
UTP5	YDR398W	VID28	P40547	921 aa		4.53	□□□□□ -1.68
UTP5	YDR398W	DUG1	P43616	481 aa	Known RBP	4.53	□□□□□ -1.68
UTP5	YDR398W	NSE5	Q03718	556 aa		4.53	□□□□□ -1.68
UTP5	YDR398W	YDL086W	Q07505	273 aa		4.53	□□□□□ -1.68
UTP5	YDR398W	CDC26	P14724	124 aa		4.52	□□□□□ -1.69
UTP5	YDR398W	TSR4	P25040	408 aa		4.52	□□□□□ -1.69
UTP5	YDR398W	FUB1	P25659	250 aa		4.52	□□□□□ -1.69
UTP5	YDR398W	TAF4	P50105	388 aa		4.52	□□□□□ -1.69
UTP5	YDR398W	SUT2	Q12286	268 aa		4.52	□□□□□ -1.69
UTP5	YDR398W	HCA4	P20448	770 aa	Known RBP	4.52	□□□□□ -1.69
UTP5	YDR398W	TAH11	P47112	604 aa		4.52	□□□□□ -1.69
UTP5	YDR398W	YSH1	Q06224	779 aa	Predicted RBP	4.52	□□□□□ -1.69
UTP5	YDR398W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
UTP5	YDR398W	PRE4	P30657	266 aa		4.51	□□□□□ -1.69
UTP5	YDR398W	DAL3	P32459	195 aa		4.51	□□□□□ -1.69
UTP5	YDR398W	EUG1	P32474	517 aa		4.51	□□□□□ -1.69
UTP5	YDR398W	GMH1	P36125	273 aa		4.51	□□□□□ -1.69
UTP5	YDR398W	YHR097C	P38809	366 aa	Known RBP	4.51	□□□□□ -1.69
UTP5	YDR398W	GPP2	P40106	250 aa	Known RBP	4.51	□□□□□ -1.69
UTP5	YDR398W	RMP1	Q12530	201 aa		4.51	□□□□□ -1.69
UTP5	YDR398W	MF(ALPHA)2	P32435	120 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	KSP1	P38691	1029 aa	Known RBP	4.5	□□□□□ -1.69
UTP5	YDR398W	ENP2	P48234	707 aa	Known RBP	4.5	□□□□□ -1.69
UTP5	YDR398W	RNR4	P49723	345 aa	Known RBP	4.5	□□□□□ -1.69
UTP5	YDR398W	TRE2	Q08693	809 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	BMS1	Q08965	1183 aa	Known RBP	4.5	□□□□□ -1.69
UTP5	YDR398W	SER1	P33330	395 aa	Known RBP	4.5	□□□□□ -1.69
UTP5	YDR398W	FDC1	Q03034	503 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	SKY1	Q03656	742 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	IZH3	Q07959	543 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	YPR027C	Q12079	277 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
UTP5	YDR398W	TMA17	Q12513	150 aa		4.5	□□□□□ -1.69
UTP5	YDR398W	AEP2	P22136	580 aa		4.49	□□□□□ -1.69
UTP5	YDR398W	YIL166C	P40445	542 aa		4.49	□□□□□ -1.69
UTP5	YDR398W	PRM2	P40534	656 aa		4.49	□□□□□ -1.69
UTP5	YDR398W	NIT2	P47016	307 aa		4.49	□□□□□ -1.69
UTP5	YDR398W	RKI1	Q12189	258 aa		4.49	□□□□□ -1.69
UTP5	YDR398W	KCC4	P25389	1037 aa		4.48	□□□□□ -1.69
UTP5	YDR398W	EMP70	P32802	667 aa		4.48	□□□□□ -1.69
UTP5	YDR398W	APL3	P38065	1025 aa		4.48	□□□□□ -1.69
UTP5	YDR398W	YBR071W	P38243	211 aa		4.48	□□□□□ -1.69
UTP5	YDR398W	CRG1	P38892	291 aa	RIP-Chip data	4.48	□□□□□ -1.69	not detected
UTP5	YDR398W	NMA2	P53204	395 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms