RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	ORM2	Q06144	216 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	RKI1	Q12189	258 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	RGT2	Q12300	763 aa		2.64	□□□□□ -1.99
CSN9	YDR179C	ERR1	P0CX10	437 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	ERR2	P0CX11	437 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	NUP1	P20676	1076 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	APN1	P22936	367 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	MIH1	P23748	554 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	PRP22	P24384	1145 aa	Known RBP	2.63	□□□□□ -1.99
CSN9	YDR179C	YUR1	P26725	428 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	YMC1	P32331	307 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	PET127	P32606	800 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	MAL31	P38156	614 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	MIT1	P40002	666 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	CCT5	P40413	562 aa	Known RBP	2.63	□□□□□ -1.99
CSN9	YDR179C	YJR039W	P47107	1121 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	ASN1	P49089	572 aa	Known RBP	2.63	□□□□□ -1.99
CSN9	YDR179C	MPS1	P54199	764 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	ARP4	P80428	489 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	YDR179W-A	Q03983	463 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	LAM4	P38800	1345 aa		2.63	□□□□□ -1.99
CSN9	YDR179C	YKR075C	P36155	307 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	AKL1	P38080	1108 aa	Known RBP	2.62	□□□□□ -1.99
CSN9	YDR179C	COS111	P38308	924 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	YHR097C	P38809	366 aa	Known RBP	2.62	□□□□□ -1.99
CSN9	YDR179C	YIL077C	P40508	320 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	ULP2	P40537	1034 aa	Predicted RBP	2.62	□□□□□ -1.99
CSN9	YDR179C	BFA1	P47113	574 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	RFX1	P48743	811 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	NMA2	P53204	395 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	DIP5	P53388	608 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	BRE5	P53741	515 aa	Known RBP	2.62	□□□□□ -1.99
CSN9	YDR179C	HFD1	Q04458	532 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	VBA4	Q04602	768 aa	Known RBP	2.62	□□□□□ -1.99
CSN9	YDR179C	YFT2	Q06676	274 aa		2.62	□□□□□ -1.99
CSN9	YDR179C	ISA1	Q07821	250 aa	Predicted RBP	2.62	□□□□□ -1.99
CSN9	YDR179C	RPS9B	P05755	195 aa	Known RBP	2.61	□□□□□ -1.99
CSN9	YDR179C	MSH2	P25847	964 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	TIM23	P32897	222 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	YKL091C	P33324	310 aa	Known RBP	2.61	□□□□□ -1.99
CSN9	YDR179C	PEX6	P33760	1030 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	MNN4	P36044	1178 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	HOT13	P36078	116 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	PIH1	P38768	344 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	YHR202W	P38887	602 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	YNL195C	P40168	261 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	PSA1	P41940	361 aa	Known RBP	2.61	□□□□□ -1.99
CSN9	YDR179C	TAX4	P47030	604 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	BIT61	P47041	543 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	SCS3	P53012	380 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	CPR8	P53728	308 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	CEF1	Q03654	590 aa	Predicted RBP	2.61	□□□□□ -1.99
CSN9	YDR179C	POB3	Q04636	552 aa	Known RBP	2.61	□□□□□ -1.99
CSN9	YDR179C	VHS3	Q08438	674 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	GIN4	Q12263	1142 aa		2.61	□□□□□ -1.99
CSN9	YDR179C	PHO8	P11491	566 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	FRS1	P15624	595 aa	Known RBP	2.6	□□□□□ -1.99
CSN9	YDR179C	NUP82	P40368	713 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	OSW7	P43611	510 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	STB2	P46679	850 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	STP1	Q00947	519 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	LEE1	Q02799	301 aa	Known RBP	2.6	□□□□□ -1.99
CSN9	YDR179C	PPN1	Q04119	674 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	ATG33	Q06485	197 aa		2.6	□□□□□ -1.99
CSN9	YDR179C	MBR1	P23493	339 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	MEF1	P25039	761 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	TSR4	P25040	408 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	PCL2	P25693	308 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	THI4	P32318	326 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	MSS1	P32559	526 aa	Predicted RBP	2.59	□□□□□ -1.99
CSN9	YDR179C	YPT7	P32939	208 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
CSN9	YDR179C	APD1	P38281	316 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	PCM1	P38628	557 aa	Known RBP	2.59	□□□□□ -1.99
CSN9	YDR179C	BUD6	P41697	788 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	YGL117W	P53133	265 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	SNF12	P53628	566 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	ARG7	Q04728	441 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	VPS36	Q06696	566 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	IZH3	Q07959	543 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	AI5_ALPHA	Q9ZZX1	630 aa		2.59	□□□□□ -1.99
CSN9	YDR179C	YMR084W	A2P2R3	262 aa		2.58	□□□□□ -2
CSN9	YDR179C	SFL1	P20134	766 aa		2.58	□□□□□ -2
CSN9	YDR179C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
CSN9	YDR179C	AAD3	P25612	363 aa		2.58	□□□□□ -2
CSN9	YDR179C	EUG1	P32474	517 aa		2.58	□□□□□ -2
CSN9	YDR179C	RIM4	P38741	713 aa		2.58	□□□□□ -2
CSN9	YDR179C	BEM4	P39011	633 aa		2.58	□□□□□ -2
CSN9	YDR179C	YMR210W	Q03649	449 aa		2.58	□□□□□ -2
CSN9	YDR179C	YDL073W	Q07454	984 aa		2.58	□□□□□ -2
CSN9	YDR179C	DCS2	Q12123	353 aa		2.58	□□□□□ -2
CSN9	YDR179C	ZPS1	Q12512	249 aa		2.58	□□□□□ -2
CSN9	YDR179C	HMG1	P12683	1054 aa		2.57	□□□□□ -2
CSN9	YDR179C	TUP1	P16649	713 aa		2.57	□□□□□ -2
CSN9	YDR179C	PMA2	P19657	947 aa		2.57	□□□□□ -2
CSN9	YDR179C	IMG2	P25642	146 aa	Predicted RBP	2.57	□□□□□ -2
CSN9	YDR179C	ELF1	P36053	145 aa		2.57	□□□□□ -2
CSN9	YDR179C	SPC97	P38863	823 aa		2.57	□□□□□ -2
CSN9	YDR179C	PXA1	P41909	870 aa		2.57	□□□□□ -2
CSN9	YDR179C	AIM14	P53109	570 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms