RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C GPB2P39717 880 aa4.7□□□□□ -1.66
CDC9YDL164C YTA6P40328 754 aa4.7□□□□□ -1.66
CDC9YDL164C CIR1P42940 261 aa4.7□□□□□ -1.66
CDC9YDL164C NOP9P47077 666 aaKnown RBP4.7□□□□□ -1.66
CDC9YDL164C BNA2P47125 453 aa4.7□□□□□ -1.66
CDC9YDL164C CCM1P48237 864 aaPredicted RBP4.7□□□□□ -1.66
CDC9YDL164C HFM1P51979 1187 aa4.7□□□□□ -1.66
CDC9YDL164C YNR061CP53747 219 aa4.7□□□□□ -1.66
CDC9YDL164C VPS75P53853 264 aa4.7□□□□□ -1.66
CDC9YDL164C YPS7Q06325 596 aa4.7□□□□□ -1.66
CDC9YDL164C SED4P25365 1065 aa4.7□□□□□ -1.66
CDC9YDL164C ADK2P26364 225 aa4.7□□□□□ -1.66
CDC9YDL164C KIP1P28742 1111 aa4.7□□□□□ -1.66
CDC9YDL164C GPI10P30777 616 aa4.7□□□□□ -1.66
CDC9YDL164C GND1P38720 489 aaKnown RBP4.7□□□□□ -1.66
CDC9YDL164C BEM4P39011 633 aa4.7□□□□□ -1.66
CDC9YDL164C RLP7P40693 322 aaKnown RBP4.7□□□□□ -1.66
CDC9YDL164C AAD14P42884 376 aa4.7□□□□□ -1.66
CDC9YDL164C PSP1P50896 841 aaKnown RBP4.7□□□□□ -1.66
CDC9YDL164C MNT2P53059 558 aa4.7□□□□□ -1.66
CDC9YDL164C YNR071CP53757 342 aa4.7□□□□□ -1.66
CDC9YDL164C RNH1Q04740 348 aa4.7□□□□□ -1.66
CDC9YDL164C YLR407WQ06070 228 aa4.7□□□□□ -1.66
CDC9YDL164C PAR32Q12515 295 aaKnown RBP4.7□□□□□ -1.66
CDC9YDL164C ADE3P07245 946 aaKnown RBP4.69□□□□□ -1.66
CDC9YDL164C BET2P20133 325 aa4.69□□□□□ -1.66
CDC9YDL164C MNE1P24720 663 aa4.69□□□□□ -1.66
CDC9YDL164C VMA13P41807 478 aaKnown RBP4.69□□□□□ -1.66
CDC9YDL164C DSD1P53095 428 aa4.69□□□□□ -1.66
CDC9YDL164C HDA1P53973 706 aa4.69□□□□□ -1.66
CDC9YDL164C RCR2Q03446 210 aaKnown RBP4.69□□□□□ -1.66
CDC9YDL164C ECM22Q05958 814 aaPredicted RBP4.69□□□□□ -1.66
CDC9YDL164C YEL076C-AP0CX16 216 aa4.69□□□□□ -1.66
CDC9YDL164C YLR464WP0CX17 216 aa4.69□□□□□ -1.66
CDC9YDL164C POL3P15436 1097 aa4.69□□□□□ -1.66
CDC9YDL164C KAR3P17119 729 aa4.69□□□□□ -1.66
CDC9YDL164C IME1P21190 360 aa4.69□□□□□ -1.66
CDC9YDL164C DLD1P32891 587 aa4.69□□□□□ -1.66
CDC9YDL164C GCS1P35197 352 aa4.69□□□□□ -1.66
CDC9YDL164C SRP68P38687 599 aaKnown RBP4.69□□□□□ -1.66
CDC9YDL164C YEL076CP39971 216 aa4.69□□□□□ -1.66
CDC9YDL164C YEL057CP39983 233 aa4.69□□□□□ -1.66
CDC9YDL164C AIR1P40507 360 aaKnown RBP4.69□□□□□ -1.66
CDC9YDL164C FET4P40988 552 aa4.69□□□□□ -1.66
CDC9YDL164C ALY2P47029 1046 aa4.69□□□□□ -1.66
CDC9YDL164C GYP7P48365 746 aa4.69□□□□□ -1.66
CDC9YDL164C YPL107WQ02873 248 aa4.69□□□□□ -1.66
CDC9YDL164C FDC1Q03034 503 aa4.69□□□□□ -1.66
CDC9YDL164C MDM38Q08179 573 aa4.69□□□□□ -1.66
CDC9YDL164C SPE3Q12074 293 aaKnown RBP4.69□□□□□ -1.66
CDC9YDL164C GPR1Q12361 961 aa4.69□□□□□ -1.66
CDC9YDL164C VAS1P07806 1104 aaKnown RBP4.68□□□□□ -1.66
CDC9YDL164C CLB4P24871 460 aa4.68□□□□□ -1.66
CDC9YDL164C SEC27P41811 889 aaKnown RBP4.68□□□□□ -1.66
CDC9YDL164C FET5P43561 622 aa4.68□□□□□ -1.66
CDC9YDL164C VTC4P47075 721 aa4.68□□□□□ -1.66
CDC9YDL164C DUO1P53168 247 aaKnown RBP4.68□□□□□ -1.66
CDC9YDL164C YSA1Q01976 231 aa4.68□□□□□ -1.66
CDC9YDL164C CSR1Q06705 408 aaKnown RBP4.68□□□□□ -1.66
CDC9YDL164C RCL1Q08096 367 aaPredicted RBP4.68□□□□□ -1.66
CDC9YDL164C THI21Q08975 551 aa4.68□□□□□ -1.66
CDC9YDL164C ALG6Q12001 544 aaKnown RBP4.68□□□□□ -1.66
CDC9YDL164C VMA2P16140 517 aaKnown RBP4.67□□□□□ -1.66
CDC9YDL164C PFK2P16862 959 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
CDC9YDL164C STE50P25344 346 aa4.67□□□□□ -1.66
CDC9YDL164C PRO1P32264 428 aa4.67□□□□□ -1.66
CDC9YDL164C QNS1P38795 714 aaKnown RBP4.67□□□□□ -1.66
CDC9YDL164C LCB2P40970 561 aa4.67□□□□□ -1.66
CDC9YDL164C YFL052WP43551 465 aa4.67□□□□□ -1.66
CDC9YDL164C ELA1P53861 379 aaPredicted RBP4.67□□□□□ -1.66
CDC9YDL164C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
CDC9YDL164C TGL5Q12043 749 aa4.67□□□□□ -1.66
CDC9YDL164C FRE6Q12473 712 aa4.67□□□□□ -1.66
CDC9YDL164C SIR1P21691 654 aa4.67□□□□□ -1.66
CDC9YDL164C MTC7P32633 139 aa4.67□□□□□ -1.66
CDC9YDL164C YNR068CP53754 272 aa4.67□□□□□ -1.66
CDC9YDL164C GCR2Q01722 534 aa4.67□□□□□ -1.66
CDC9YDL164C MEC3Q02574 474 aa4.67□□□□□ -1.66
CDC9YDL164C SRT1Q03175 343 aa4.67□□□□□ -1.66
CDC9YDL164C STP4Q07351 490 aa4.67□□□□□ -1.66
CDC9YDL164C IWR1Q07532 353 aaPredicted RBP4.67□□□□□ -1.66
CDC9YDL164C PHO5P00635 467 aa4.66□□□□□ -1.66
CDC9YDL164C TRX1P22217 103 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C CAP1P28495 268 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C MDL1P33310 695 aa4.66□□□□□ -1.66
CDC9YDL164C AHP1P38013 176 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C MRPL16P38064 232 aa4.66□□□□□ -1.66
CDC9YDL164C AKL1P38080 1108 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C SAW1P39735 261 aa4.66□□□□□ -1.66
CDC9YDL164C PSF2P40359 213 aa4.66□□□□□ -1.66
CDC9YDL164C FYV8P46949 817 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C ACS1Q01574 713 aa4.66□□□□□ -1.66
CDC9YDL164C YML119WQ03208 357 aa4.66□□□□□ -1.66
CDC9YDL164C RPC11Q04307 110 aaPredicted RBP4.66□□□□□ -1.66
CDC9YDL164C GTB1Q04924 702 aa4.66□□□□□ -1.66
CDC9YDL164C ACM1Q08981 209 aa4.66□□□□□ -1.66
CDC9YDL164C SGT2Q12118 346 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C YCK2P23292 546 aaKnown RBP4.66□□□□□ -1.66
CDC9YDL164C SWC3P31376 625 aa4.66□□□□□ -1.66
CDC9YDL164C YKR078WP36158 585 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms