RNA–Protein interactions for RNA: YDL136W

RPL35B, Transcript of Ribosomal 60S subunit protein L35B, yeast

Gene RPL35B, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35B	YDL136W	ERG20	P08524	352 aa	Known RBP	4.65	□□□□□ -1.67
RPL35B	YDL136W	PGI1	P12709	554 aa	Known RBP	4.65	□□□□□ -1.67
RPL35B	YDL136W	APA1	P16550	321 aa	Known RBP	4.65	□□□□□ -1.67
RPL35B	YDL136W	YBR053C	P38235	358 aa		4.65	□□□□□ -1.67
RPL35B	YDL136W	HOS4	P40480	1083 aa		4.65	□□□□□ -1.67
RPL35B	YDL136W	BAP3	P41815	604 aa		4.65	□□□□□ -1.67
RPL35B	YDL136W	TAF4	P50105	388 aa		4.65	□□□□□ -1.67
RPL35B	YDL136W	PHO23	P50947	330 aa		4.65	□□□□□ -1.67
RPL35B	YDL136W	CTK1	Q03957	528 aa	Known RBP	4.65	□□□□□ -1.67
RPL35B	YDL136W	RRP6	Q12149	733 aa	Known RBP	4.65	□□□□□ -1.67
RPL35B	YDL136W	YOL114C	Q12322	202 aa		4.65	□□□□□ -1.67
RPL35B	YDL136W	MSS18	P08593	268 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	LAT1	P12695	482 aa	Known RBP	4.64	□□□□□ -1.67
RPL35B	YDL136W	PHO3	P24031	467 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	PWP2	P25635	923 aa	Known RBP	4.64	□□□□□ -1.67
RPL35B	YDL136W	YHR033W	P38690	423 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	YHL041W	P38730	149 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	FMO1	P38866	432 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	STL1	P39932	569 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	IES5	P40060	125 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	ELO3	P40319	345 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	YIR042C	P40586	236 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	PXA1	P41909	870 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	CLU1	Q03690	1277 aa	Known RBP	4.64	□□□□□ -1.67
RPL35B	YDL136W	ATG16	Q03818	150 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	VBA4	Q04602	768 aa	Known RBP	4.64	□□□□□ -1.67
RPL35B	YDL136W	RTK1	Q12100	620 aa	Predicted RBP	4.64	□□□□□ -1.67
RPL35B	YDL136W	ATG11	Q12527	1178 aa		4.64	□□□□□ -1.67
RPL35B	YDL136W	PMA1	P05030	918 aa	Known RBP	4.63	□□□□□ -1.67
RPL35B	YDL136W	CAF20	P12962	161 aa	Known RBP	4.63	□□□□□ -1.67
RPL35B	YDL136W	HOP1	P20050	605 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	PEX1	P24004	1043 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	MTC7	P32633	139 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	RIM4	P38741	713 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RPL35B	YDL136W	SCS2	P40075	244 aa	Known RBP	4.63	□□□□□ -1.67
RPL35B	YDL136W	QRI7	P43122	407 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	ENP2	P48234	707 aa	Known RBP	4.63	□□□□□ -1.67
RPL35B	YDL136W	ASK10	P48361	1146 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	NSE5	Q03718	556 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	DLT1	Q04216	342 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	THI22	Q06490	572 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	POM34	Q12445	299 aa		4.63	□□□□□ -1.67
RPL35B	YDL136W	RPS9B	P05755	195 aa	Known RBP	4.62	□□□□□ -1.67
RPL35B	YDL136W	MET3	P08536	511 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	PRE4	P30657	266 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	CDS1	P38221	457 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	PRM2	P40534	656 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	IRC24	P40580	263 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	AMA1	P50082	593 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	TAN1	P53072	289 aa	Predicted RBP	4.62	□□□□□ -1.67
RPL35B	YDL136W	MOT3	P54785	490 aa	Known RBP	4.62	□□□□□ -1.67
RPL35B	YDL136W	IRC13	Q08630	104 aa		4.62	□□□□□ -1.67
RPL35B	YDL136W	TRX2	P22803	104 aa	Known RBP	4.61	□□□□□ -1.67
RPL35B	YDL136W	CTS1	P29029	562 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	MVD1	P32377	396 aa	Known RBP	4.61	□□□□□ -1.67
RPL35B	YDL136W	RMA1	P36001	430 aa	Known RBP	4.61	□□□□□ -1.67
RPL35B	YDL136W	BCD1	P38772	366 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	NUP60	P39705	539 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	SAW1	P39735	261 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	MAD2	P40958	196 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	PUS4	P48567	403 aa	Known RBP	4.61	□□□□□ -1.67
RPL35B	YDL136W	MNT2	P53059	558 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	PPN1	Q04119	674 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	HIM1	Q06674	414 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	BRE1	Q07457	700 aa	Known RBP	4.61	□□□□□ -1.67
RPL35B	YDL136W	DIA2	Q08496	732 aa	Predicted RBP	4.61	□□□□□ -1.67
RPL35B	YDL136W	DIN7	Q12086	430 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	PSF3	Q12146	194 aa		4.61	□□□□□ -1.67
RPL35B	YDL136W	ADH4	P10127	382 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	HMG2	P12684	1045 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	ERG4	P25340	473 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	KIN82	P25341	720 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	HCM1	P25364	564 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	FEN2	P25621	512 aa	Known RBP	4.6	□□□□□ -1.67
RPL35B	YDL136W	EFT1	P32324	842 aa	Known RBP	4.6	□□□□□ -1.67
RPL35B	YDL136W	BCS1	P32839	456 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	TGL1	P34163	548 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	CRG1	P38892	291 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
RPL35B	YDL136W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RPL35B	YDL136W	CCT3	P39077	534 aa	Known RBP	4.6	□□□□□ -1.67
RPL35B	YDL136W	YIL077C	P40508	320 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	UBC11	P52492	156 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	YGR021W	P53212	290 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	SPO1	P53541	631 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	TEP1	P53916	434 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	VMS1	Q04311	632 aa	Known RBP	4.6	□□□□□ -1.67
RPL35B	YDL136W	HLR1	Q04429	423 aa		4.6	□□□□□ -1.67
RPL35B	YDL136W	TUP1	P16649	713 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	SEC18	P18759	758 aa	Known RBP	4.59	□□□□□ -1.67
RPL35B	YDL136W	PRP22	P24384	1145 aa	Known RBP	4.59	□□□□□ -1.67
RPL35B	YDL136W	HRR25	P29295	494 aa	Known RBP	4.59	□□□□□ -1.67
RPL35B	YDL136W	YKL222C	P35995	705 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	SHM2	P37291	469 aa	Known RBP	4.59	□□□□□ -1.67
RPL35B	YDL136W	COS111	P38308	924 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	FTR1	P40088	404 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	IMA5	P40884	581 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	YJL163C	P46996	555 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	YDL183C	P48569	320 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	RFX1	P48743	811 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 133.2 ms