RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C SAS4Q04003 481 aa6.33□□□□□ -1.4
RGD1YBR260C YDL114WQ07530 308 aa6.33□□□□□ -1.4
RGD1YBR260C GPI13Q07830 1017 aa6.33□□□□□ -1.4
RGD1YBR260C ATP16Q12165 160 aa6.33□□□□□ -1.4
RGD1YBR260C LSO2Q3E772 92 aaKnown RBP6.33□□□□□ -1.4
RGD1YBR260C YEL077CQ3E7X8 1277 aa6.33□□□□□ -1.4
RGD1YBR260C ARG82P07250 355 aa6.32□□□□□ -1.4
RGD1YBR260C ILS1P09436 1072 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C SEC18P18759 758 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C CLN2P20438 545 aa6.32□□□□□ -1.4
RGD1YBR260C SMI1P32566 505 aa6.32□□□□□ -1.4
RGD1YBR260C RCK2P38623 610 aa6.32□□□□□ -1.4
RGD1YBR260C DYS1P38791 387 aa6.32□□□□□ -1.4
RGD1YBR260C SBE2P42223 864 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C YJL107CP42947 387 aa6.32□□□□□ -1.4
RGD1YBR260C FMP32P43557 207 aa6.32□□□□□ -1.4
RGD1YBR260C ULP1Q02724 621 aa6.32□□□□□ -1.4
RGD1YBR260C EEB1Q02891 456 aa6.32□□□□□ -1.4
RGD1YBR260C RAD30Q04049 632 aa6.32□□□□□ -1.4
RGD1YBR260C RPN13O13563 156 aa6.32□□□□□ -1.4
RGD1YBR260C GBP2P25555 427 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
RGD1YBR260C IRE1P32361 1115 aa6.32□□□□□ -1.4
RGD1YBR260C TFB1P32776 642 aa6.32□□□□□ -1.4
RGD1YBR260C MET1P36150 593 aa6.32□□□□□ -1.4
RGD1YBR260C CRG1P38892 291 aaRIP-Chip data6.32□□□□□ -1.4not detected
RGD1YBR260C SSP120P39931 234 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C PCI8P40512 444 aa6.32□□□□□ -1.4
RGD1YBR260C ULP2P40537 1034 aaPredicted RBP6.32□□□□□ -1.4
RGD1YBR260C MNN11P46985 422 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C YJL181WP46987 611 aa6.32□□□□□ -1.4
RGD1YBR260C TY4A-JP47023 414 aa6.32□□□□□ -1.4
RGD1YBR260C SSN8P47821 323 aa6.32□□□□□ -1.4
RGD1YBR260C ISM1P48526 1002 aa6.32□□□□□ -1.4
RGD1YBR260C YGL108CP53139 140 aa6.32□□□□□ -1.4
RGD1YBR260C SED5Q01590 340 aa6.32□□□□□ -1.4
RGD1YBR260C NOG1Q02892 647 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C SRL4Q03085 281 aa6.32□□□□□ -1.4
RGD1YBR260C FMN1Q03778 218 aa6.32□□□□□ -1.4
RGD1YBR260C TDA5Q06417 326 aaKnown RBP6.32□□□□□ -1.4
RGD1YBR260C SYO1Q07395 620 aa6.32□□□□□ -1.4
RGD1YBR260C YPR202WQ08993 238 aa6.32□□□□□ -1.4
RGD1YBR260C RKM4Q12504 494 aa6.32□□□□□ -1.4
RGD1YBR260C COR1P07256 457 aa6.31□□□□□ -1.4
RGD1YBR260C OM45P16547 393 aa6.31□□□□□ -1.4
RGD1YBR260C MEI4P29467 408 aa6.31□□□□□ -1.4
RGD1YBR260C MGM1P32266 881 aa6.31□□□□□ -1.4
RGD1YBR260C MAE1P36013 669 aaKnown RBP6.31□□□□□ -1.4
RGD1YBR260C YKL023WP36103 277 aaKnown RBP6.31□□□□□ -1.4
RGD1YBR260C YBR139WP38109 508 aa6.31□□□□□ -1.4
RGD1YBR260C HXT6P39003 570 aaKnown RBP6.31□□□□□ -1.4
RGD1YBR260C HXT7P39004 570 aa6.31□□□□□ -1.4
RGD1YBR260C IML2P47031 731 aa6.31□□□□□ -1.4
RGD1YBR260C YJR008WP47085 338 aa6.31□□□□□ -1.4
RGD1YBR260C MIG2P53035 382 aa6.31□□□□□ -1.4
RGD1YBR260C HOS2P53096 452 aaPredicted RBP6.31□□□□□ -1.4
RGD1YBR260C YNL108CP53929 270 aa6.31□□□□□ -1.4
RGD1YBR260C SKI8Q02793 397 aaPredicted RBP6.31□□□□□ -1.4
RGD1YBR260C UBP16Q02863 499 aa6.31□□□□□ -1.4
RGD1YBR260C ASA1Q06822 443 aa6.31□□□□□ -1.4
RGD1YBR260C SGT1Q08446 395 aa6.31□□□□□ -1.4
RGD1YBR260C SSF2Q12153 453 aaPredicted RBP6.31□□□□□ -1.4
RGD1YBR260C AI5_ALPHAQ9ZZX1 630 aa6.31□□□□□ -1.4
RGD1YBR260C MF(ALPHA)1P01149 165 aa6.3□□□□□ -1.4
RGD1YBR260C CHO2P05374 869 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C PEP5P12868 1029 aa6.3□□□□□ -1.4
RGD1YBR260C YAP1P19880 650 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C SSA4P22202 642 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C VPS34P22543 875 aa6.3□□□□□ -1.4
RGD1YBR260C OCA4P25366 362 aa6.3□□□□□ -1.4
RGD1YBR260C GFD2P25370 566 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C HEM3P28789 327 aa6.3□□□□□ -1.4
RGD1YBR260C MCM5P29496 775 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C TFC4P33339 1025 aa6.3□□□□□ -1.4
RGD1YBR260C APL2P36000 726 aaPredicted RBP6.3□□□□□ -1.4
RGD1YBR260C NTR2P36118 322 aaPredicted RBP6.3□□□□□ -1.4
RGD1YBR260C KAP104P38217 918 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C YHL012WP38709 493 aa6.3□□□□□ -1.4
RGD1YBR260C LSM12P38828 187 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C IOC3P43596 787 aa6.3□□□□□ -1.4
RGD1YBR260C PSP1P50896 841 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C RBG2P53295 368 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C SHR3Q02774 210 aa6.3□□□□□ -1.4
RGD1YBR260C HEL2Q05580 639 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C RGC1Q06108 1083 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C BCP1Q06338 283 aa6.3□□□□□ -1.4
RGD1YBR260C YDL109CQ12103 647 aa6.3□□□□□ -1.4
RGD1YBR260C YBR298C-AQ8TGK4 73 aa6.3□□□□□ -1.4
RGD1YBR260C YLR462WO13556 202 aa6.3□□□□□ -1.4
RGD1YBR260C CDC31P06704 161 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C SSB1P11484 613 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C PDC5P16467 563 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C PUF4P25339 888 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
RGD1YBR260C SNT1P25357 1226 aa6.3□□□□□ -1.4
RGD1YBR260C RPC53P25441 422 aa6.3□□□□□ -1.4
RGD1YBR260C RAD14P28519 371 aa6.3□□□□□ -1.4
RGD1YBR260C PEX2P32800 271 aa6.3□□□□□ -1.4
RGD1YBR260C PAM1P37304 830 aaKnown RBP6.3□□□□□ -1.4
RGD1YBR260C SDH8P38345 138 aa6.3□□□□□ -1.4
RGD1YBR260C YHL049CP38722 271 aa6.3□□□□□ -1.4
RGD1YBR260C YEL075CP39972 122 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms