RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C MDM36Q06820 579 aa5.99□□□□□ -1.45
PDB1YBR221C KEL3Q08979 651 aaPredicted RBP5.99□□□□□ -1.45
PDB1YBR221C KCS1Q12494 1050 aa5.99□□□□□ -1.45
PDB1YBR221C MIS1P09440 975 aaKnown RBP5.98□□□□□ -1.45
PDB1YBR221C INO1P11986 533 aa5.98□□□□□ -1.45
PDB1YBR221C ENA1P13587 1091 aa5.98□□□□□ -1.45
PDB1YBR221C SED4P25365 1065 aa5.98□□□□□ -1.45
PDB1YBR221C MLS1P30952 554 aa5.98□□□□□ -1.45
PDB1YBR221C NGG1P32494 702 aa5.98□□□□□ -1.45
PDB1YBR221C LOT5P34234 306 aa5.98□□□□□ -1.45
PDB1YBR221C SQT1P35184 431 aa5.98□□□□□ -1.45
PDB1YBR221C SWH1P35845 1188 aa5.98□□□□□ -1.45
PDB1YBR221C NCL1P38205 684 aaKnown RBP5.98□□□□□ -1.45
PDB1YBR221C HSL7P38274 827 aa5.98□□□□□ -1.45
PDB1YBR221C YBR225WP38321 900 aa5.98□□□□□ -1.45
PDB1YBR221C UTP9P38882 575 aaKnown RBP5.98□□□□□ -1.45
PDB1YBR221C RIX1P38883 763 aaPredicted RBP5.98□□□□□ -1.45
PDB1YBR221C RTS1P38903 757 aa5.98□□□□□ -1.45
PDB1YBR221C STL1P39932 569 aa5.98□□□□□ -1.45
PDB1YBR221C BUD16P39988 312 aa5.98□□□□□ -1.45
PDB1YBR221C EPL1P43572 832 aa5.98□□□□□ -1.45
PDB1YBR221C MON1P53129 644 aa5.98□□□□□ -1.45
PDB1YBR221C CEG1Q01159 459 aaPredicted RBP5.98□□□□□ -1.45
PDB1YBR221C ENA2Q01896 1091 aa5.98□□□□□ -1.45
PDB1YBR221C PNG1Q02890 363 aa5.98□□□□□ -1.45
PDB1YBR221C DPL1Q05567 589 aa5.98□□□□□ -1.45
PDB1YBR221C WSC3Q12215 556 aa5.98□□□□□ -1.45
PDB1YBR221C ARP7Q12406 477 aa5.98□□□□□ -1.45
PDB1YBR221C RVB2Q12464 471 aaKnown RBP5.98□□□□□ -1.45
PDB1YBR221C FRE6Q12473 712 aa5.98□□□□□ -1.45
PDB1YBR221C ENA5Q12691 1091 aa5.98□□□□□ -1.45
PDB1YBR221C RIM15P43565 1770 aa5.98□□□□□ -1.45
PDB1YBR221C PHR1P05066 565 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
PDB1YBR221C LEU1P07264 779 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C LAT1P12695 482 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C THR1P17423 357 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C GPI10P30777 616 aa5.97□□□□□ -1.45
PDB1YBR221C IRE1P32361 1115 aa5.97□□□□□ -1.45
PDB1YBR221C RMA1P36001 430 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C TEF4P36008 412 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C LAS1P36146 502 aaPredicted RBP5.97□□□□□ -1.45
PDB1YBR221C BSD2P38356 321 aa5.97□□□□□ -1.45
PDB1YBR221C PCM1P38628 557 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C MTG2P38860 518 aa5.97□□□□□ -1.45
PDB1YBR221C MBP1P39678 833 aa5.97□□□□□ -1.45
PDB1YBR221C FIR1P40020 876 aa5.97□□□□□ -1.45
PDB1YBR221C ALG2P43636 503 aa5.97□□□□□ -1.45
PDB1YBR221C YGR153WP48238 217 aa5.97□□□□□ -1.45
PDB1YBR221C GIM3P53900 129 aa5.97□□□□□ -1.45
PDB1YBR221C EOS1P53938 366 aa5.97□□□□□ -1.45
PDB1YBR221C YML119WQ03208 357 aa5.97□□□□□ -1.45
PDB1YBR221C ADE13Q05911 482 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C HDA2Q06629 674 aa5.97□□□□□ -1.45
PDB1YBR221C CSR1Q06705 408 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C YPR027CQ12079 277 aa5.97□□□□□ -1.45
PDB1YBR221C PDH1Q12428 516 aaKnown RBP5.97□□□□□ -1.45
PDB1YBR221C HVG1P0CE11 249 aa5.96□□□□□ -1.46
PDB1YBR221C HSF1P10961 833 aa5.96□□□□□ -1.46
PDB1YBR221C GRR1P24814 1151 aa5.96□□□□□ -1.46
PDB1YBR221C ROX1P25042 368 aa5.96□□□□□ -1.46
PDB1YBR221C PHO84P25297 587 aaKnown RBP5.96□□□□□ -1.46
PDB1YBR221C STE50P25344 346 aa5.96□□□□□ -1.46
PDB1YBR221C VMA3P25515 160 aa5.96□□□□□ -1.46
PDB1YBR221C POT1P27796 417 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
PDB1YBR221C MRP4P32902 394 aa5.96□□□□□ -1.46
PDB1YBR221C SCD5P34758 872 aa5.96□□□□□ -1.46
PDB1YBR221C DCW1P36091 449 aa5.96□□□□□ -1.46
PDB1YBR221C LDH1P38139 375 aa5.96□□□□□ -1.46
PDB1YBR221C YBR284WP38150 797 aa5.96□□□□□ -1.46
PDB1YBR221C DED81P38707 554 aaKnown RBP5.96□□□□□ -1.46
PDB1YBR221C PAN5P38787 379 aa5.96□□□□□ -1.46
PDB1YBR221C AXL2P38928 823 aa5.96□□□□□ -1.46
PDB1YBR221C SWD1P39706 426 aa5.96□□□□□ -1.46
PDB1YBR221C RVS167P39743 482 aaKnown RBP5.96□□□□□ -1.46
PDB1YBR221C HXT13P39924 564 aa5.96□□□□□ -1.46
PDB1YBR221C LCB2P40970 561 aa5.96□□□□□ -1.46
PDB1YBR221C PXA1P41909 870 aa5.96□□□□□ -1.46
PDB1YBR221C RSM26P47141 266 aa5.96□□□□□ -1.46
PDB1YBR221C ASK10P48361 1146 aa5.96□□□□□ -1.46
PDB1YBR221C YGL082WP53155 381 aa5.96□□□□□ -1.46
PDB1YBR221C YGR117CP53270 476 aa5.96□□□□□ -1.46
PDB1YBR221C LSB1P53281 241 aa5.96□□□□□ -1.46
PDB1YBR221C HXT17P53631 564 aa5.96□□□□□ -1.46
PDB1YBR221C ARC35P53731 342 aaKnown RBP5.96□□□□□ -1.46
PDB1YBR221C DSL1P53847 754 aa5.96□□□□□ -1.46
PDB1YBR221C JJJ1P53863 590 aa5.96□□□□□ -1.46
PDB1YBR221C CBK1P53894 756 aa5.96□□□□□ -1.46
PDB1YBR221C SIW14P53965 281 aa5.96□□□□□ -1.46
PDB1YBR221C HXT15P54854 567 aa5.96□□□□□ -1.46
PDB1YBR221C MRPL13Q02204 264 aa5.96□□□□□ -1.46
PDB1YBR221C HLR1Q04429 423 aa5.96□□□□□ -1.46
PDB1YBR221C YLR345WQ06137 509 aa5.96□□□□□ -1.46
PDB1YBR221C PMT7Q06644 662 aa5.96□□□□□ -1.46
PDB1YBR221C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
PDB1YBR221C SKS1Q12505 502 aa5.96□□□□□ -1.46
PDB1YBR221C MET17P06106 444 aa5.95□□□□□ -1.46
PDB1YBR221C SNF1P06782 633 aaKnown RBP5.95□□□□□ -1.46
PDB1YBR221C SEC23P15303 768 aaKnown RBP5.95□□□□□ -1.46
PDB1YBR221C HOP1P20050 605 aa5.95□□□□□ -1.46
PDB1YBR221C RRP7P25368 297 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms