RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YPR027C	Q12079	277 aa		5.09	□□□□□ -1.59
SHE1	YBL031W	SLX4	Q12098	748 aa		5.09	□□□□□ -1.59
SHE1	YBL031W	SEC7	P11075	2009 aa	Known RBP	5.09	□□□□□ -1.6
SHE1	YBL031W	TOP1	P04786	769 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	TUB3	P09734	445 aa	Known RBP	5.08	□□□□□ -1.6
SHE1	YBL031W	SWI6	P09959	803 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	SEC6	P32844	805 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	TRM2	P33753	639 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	TRZ1	P36159	838 aa	Predicted RBP	5.08	□□□□□ -1.6
SHE1	YBL031W	BIT2	P38346	545 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	BEM4	P39011	633 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	VHR1	P40522	640 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
SHE1	YBL031W	RNR4	P49723	345 aa	Known RBP	5.08	□□□□□ -1.6
SHE1	YBL031W	SND1	Q04007	877 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	PHM6	Q05637	104 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	YLR224W	Q05947	369 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	KCS1	Q12494	1050 aa		5.08	□□□□□ -1.6
SHE1	YBL031W	HAP1	P0CE41	1502 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	YLR415C	O13578	112 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	SEC65	P29478	273 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	APT2	P36973	181 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	APN2	P38207	520 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	YBR259W	P38338	688 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	SET2	P46995	733 aa	Known RBP	5.07	□□□□□ -1.6
SHE1	YBL031W	BRE5	P53741	515 aa	Known RBP	5.07	□□□□□ -1.6
SHE1	YBL031W	MCM21	Q06675	368 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	PEX15	Q08215	383 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	TRM11	Q12463	433 aa		5.07	□□□□□ -1.6
SHE1	YBL031W	RPS21B	Q3E754	87 aa	Known RBP	5.07	□□□□□ -1.6
SHE1	YBL031W	YOR093C	Q12275	1648 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	STE11	P23561	717 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	GID8	P40208	455 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	PRP31	P49704	494 aa	Predicted RBP	5.06	□□□□□ -1.6
SHE1	YBL031W	SLD3	P53135	668 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	SPC105	P53148	917 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	YNL034W	P53963	612 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	YNL018C	P53976	612 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	TAP42	Q04372	366 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	PEX19	Q07418	342 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	PUS9	Q12069	462 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	VMR1	P38735	1592 aa		5.06	□□□□□ -1.6
SHE1	YBL031W	RPS21A	P0C0V8	87 aa	Known RBP	5.05	□□□□□ -1.6
SHE1	YBL031W	COX11	P19516	300 aa	Known RBP	5.05	□□□□□ -1.6
SHE1	YBL031W	HEM12	P32347	362 aa	Predicted RBP	5.05	□□□□□ -1.6
SHE1	YBL031W	APL2	P36000	726 aa	Predicted RBP	5.05	□□□□□ -1.6
SHE1	YBL031W	AKL1	P38080	1108 aa	Known RBP	5.05	□□□□□ -1.6
SHE1	YBL031W	PLB1	P39105	664 aa		5.05	□□□□□ -1.6
SHE1	YBL031W	NUG1	P40010	520 aa	Known RBP	5.05	□□□□□ -1.6
SHE1	YBL031W	MSE1	P48525	536 aa		5.05	□□□□□ -1.6
SHE1	YBL031W	TGL2	P54857	326 aa		5.05	□□□□□ -1.6
SHE1	YBL031W	ASM4	Q05166	528 aa		5.05	□□□□□ -1.6
SHE1	YBL031W	ENB1	Q08299	606 aa		5.05	□□□□□ -1.6
SHE1	YBL031W	YOR378W	Q08902	515 aa		5.05	□□□□□ -1.6
SHE1	YBL031W	IML1	P47170	1584 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	SST2	P11972	698 aa	Known RBP	5.04	□□□□□ -1.6
SHE1	YBL031W	PRP4	P20053	465 aa	Known RBP	5.04	□□□□□ -1.6
SHE1	YBL031W	DAL3	P32459	195 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	MSS4	P38994	779 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	ENP2	P48234	707 aa	Known RBP	5.04	□□□□□ -1.6
SHE1	YBL031W	ARG5,6	Q01217	863 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	REC102	Q02721	264 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	NRG1	Q03125	231 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	YMR210W	Q03649	449 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	YDL144C	Q07589	356 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	NYV1	Q12255	253 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	PDR11	P40550	1411 aa		5.04	□□□□□ -1.6
SHE1	YBL031W	LEU2	P04173	364 aa	Predicted RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	PYC1	P11154	1178 aa	Known RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	ADE2	P21264	571 aa	Known RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	HCM1	P25364	564 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	KAR4	P25583	335 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	CTF13	P35203	478 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	RPP1	P38786	293 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	YHR202W	P38887	602 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	DAS1	P47005	663 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	EXG2	P52911	562 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	NOP15	P53927	220 aa	Predicted RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	SLU7	Q02775	382 aa	Known RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	HMO1	Q03973	246 aa	Known RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	YLR407W	Q06070	228 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SHE1	YBL031W	RVB2	Q12464	471 aa	Known RBP	5.03	□□□□□ -1.6
SHE1	YBL031W	YRF1-1	P0CX20	1796 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	YRF1-5	P0CX21	1796 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	YRF1-8	P0CX22	1796 aa		5.03	□□□□□ -1.6
SHE1	YBL031W	CHC1	P22137	1653 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	RPS17A	P02407	136 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	RPS17B	P14127	136 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	HCA4	P20448	770 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	IMG2	P25642	146 aa	Predicted RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	HIR1	P32479	840 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	YKU70	P32807	602 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	SER1	P33330	395 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	NIC96	P34077	839 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	YPT53	P36019	220 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	TAN1	P53072	289 aa	Predicted RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	MCM6	P53091	1017 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	HOL1	P53389	586 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	LEE1	Q02799	301 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms