RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SLC9C2Q5TAH2 1124 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 SPTY2D1Q68D10 685 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-215ENST00000641371 C3orf67Q6ZVT6 689 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 FBXO33Q7Z6M2 555 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 CERS3Q8IU89 383 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 JAKMIP1Q96N16 626 aaKnown RBP11.59□□□□□ -0.55
PHGDH-215ENST00000641371 TTC14Q96N46 770 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 SLKQ9H2G2 1235 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-215ENST00000641371 LIMCH1Q9UPQ0 1083 aa11.59□□□□□ -0.55
PHGDH-215ENST00000641371 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-215ENST00000641371 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 IDH1O75874 414 aaKnown RBP11.58□□□□□ -0.56
PHGDH-215ENST00000641371 NPR1P16066 1061 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 PDE6AP16499 860 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 HIBADHP31937 336 aaKnown RBP11.58□□□□□ -0.56
PHGDH-215ENST00000641371 DDIT3P35638 169 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 NT5C2P49902 561 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 ALX1Q15699 326 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 ZNF827Q17R98 1081 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 ZNF804AQ7Z570 1209 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-215ENST00000641371 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 TMX3Q96JJ7 454 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 MAST2Q6P0Q8 1798 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 PNPLA7Q6ZV29 1317 aa11.58□□□□□ -0.56
PHGDH-215ENST00000641371 TAF1P21675 1872 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 GPAA1O43292 621 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 FRAT2O75474 233 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-215ENST00000641371 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
PHGDH-215ENST00000641371 BCAMP50895 628 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 DDR1Q08345 913 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 WDR66Q8TBY9 1149 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 GBP4Q96PP9 640 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 CAMKK2Q96RR4 588 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 ANKIB1Q9P2G1 1089 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 LRP2BPQ9P2M1 347 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 NDUFB9Q9Y6M9 179 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 WDR19Q8NEZ3 1342 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 SALL1Q9NSC2 1324 aa11.57□□□□□ -0.56
PHGDH-215ENST00000641371 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 RPS6KB1P23443 525 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 FBXL16Q8N461 479 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 SLC16A10Q8TF71 515 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-215ENST00000641371 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
PHGDH-215ENST00000641371 PIH1D3Q9NQM4 214 aaKnown RBP11.56□□□□□ -0.56
PHGDH-215ENST00000641371 GGA1Q9UJY5 639 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
PHGDH-215ENST00000641371 ANKRD31Q8N7Z5 1873 aa11.55□□□□□ -0.56
PHGDH-215ENST00000641371 TCRBV5S4A2TA0A5A2 114 aa11.55□□□□□ -0.56
PHGDH-215ENST00000641371 DDX11L8A8MPP1 907 aa11.55□□□□□ -0.56
PHGDH-215ENST00000641371 M0R2C6 588 aa11.55□□□□□ -0.56
PHGDH-215ENST00000641371 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
PHGDH-215ENST00000641371 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
PHGDH-215ENST00000641371 SEC62Q99442 399 aaKnown RBP11.55□□□□□ -0.56
PHGDH-215ENST00000641371 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
PHGDH-215ENST00000641371 EP400Q96L91 3159 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 PATL2C9JE40 543 aaKnown RBP11.54□□□□□ -0.56
PHGDH-215ENST00000641371 GOLGA6L22H0YM25 854 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 ZNF213O14771 459 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 CYP21A2P08686 494 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 MMP10P09238 476 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
PHGDH-215ENST00000641371 GYG1P46976 350 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 AK2P54819 239 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 GSTO1P78417 241 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 TRDNQ13061 729 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 RAB3GAP1Q15042 981 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 STYK1Q6J9G0 422 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 GIMAP6Q6P9H5 292 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 DHX32Q7L7V1 743 aaKnown RBP11.54□□□□□ -0.56
PHGDH-215ENST00000641371 MAGEB6Q8N7X4 407 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 TBC1D22AQ8WUA7 517 aa11.54□□□□□ -0.56
PHGDH-215ENST00000641371 COL4A1P02462 1669 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-215ENST00000641371 SRGNP10124 158 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 NFKBIBQ15653 356 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 ADCK5Q3MIX3 580 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 CC2D2BQ6DHV5 1058 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 CLEC17AQ6ZS10 378 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 RALYLQ86SE5 291 aaKnown RBP11.53□□□□□ -0.56
PHGDH-215ENST00000641371 SLF2Q8IX21 1173 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
PHGDH-215ENST00000641371 MTA3Q9BTC8 594 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 PUS7LQ9H0K6 701 aaKnown RBP11.53□□□□□ -0.56
PHGDH-215ENST00000641371 RNF41Q9H4P4 317 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms