RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-223ENST00000630866 RBM8AQ9Y5S9 174 aaKnown RBP9.81□□□□□ -0.84
SPTAN1-223ENST00000630866 FAM13AO94988 1023 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 TOP1P11387 765 aaKnown RBP9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 CCDC102BQ68D86 513 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 TFIP11Q9UBB9 837 aaKnown RBP9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 YEATS4O95619 227 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 TBC1D22AQ8WUA7 517 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 SHANK2Q9UPX8 1470 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 LPXNO60711 386 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 DPH6Q7L8W6 267 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 CFAP57Q96MR6 1250 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 ERLIN1O75477 346 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 MBD4O95243 580 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 ANKRD44Q8N8A2 993 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 KRT79Q5XKE5 535 aa9.8□□□□□ -0.84
SPTAN1-223ENST00000630866 ACTN2P35609 894 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 TRIM47Q96LD4 638 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 ABCA5Q8WWZ7 1642 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 LTKP29376 864 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 LMAN1P49257 510 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 CHD1O14646 1710 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 SFPQP23246 707 aaKnown RBP eCLIP9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 OTUD7BQ6GQQ9 843 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 ZSCAN16Q9H4T2 348 aaPredicted RBP9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 Q6ZUG5 572 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 A0A1B0GUL7 405 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 DNA2P51530 1060 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 BABAM1Q9NWV8 329 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 PKD2L1Q9P0L9 805 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 TTC41PQ6P2S7 1318 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 EYA2O00167 538 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 PDE1AP54750 535 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 CCDC183Q5T5S1 534 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 PHACTR3Q96KR7 559 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 AS3MTQ9HBK9 375 aa9.79□□□□□ -0.84
SPTAN1-223ENST00000630866 NPHP4O75161 1426 aaPredicted RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 TAF5LO75529 589 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 RBM28Q9NW13 759 aaKnown RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 BIN1O00499 593 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 KRT2P35908 639 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 NMIQ13287 307 aaPredicted RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 CPLX3Q8WVH0 158 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 M0QZ92 97 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 SPOUT1Q5T280 376 aaKnown RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 AATFQ9NY61 560 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 GINS2Q9Y248 185 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 TMCO5BA8MYB1 307 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 GTF2IP78347 998 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 DCAF15Q66K64 600 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 LUZP1Q86V48 1076 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 CPXCR1Q8N123 301 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 MRPS9P82933 396 aaKnown RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 MAP2K1Q02750 393 aaPredicted RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 PABPC4Q13310 644 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 TEKT1Q969V4 418 aa9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 NAP1L4Q99733 375 aaKnown RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 TRIM6Q9C030 488 aaPredicted RBP9.78□□□□□ -0.84
SPTAN1-223ENST00000630866 KIF5CO60282 957 aa9.77□□□□□ -0.84
SPTAN1-223ENST00000630866 MYCLP12524 364 aaPredicted RBP9.77□□□□□ -0.84
SPTAN1-223ENST00000630866 SDSP20132 328 aa9.77□□□□□ -0.84
SPTAN1-223ENST00000630866 FAM193AP78312 1265 aa9.77□□□□□ -0.84
SPTAN1-223ENST00000630866 HS2ST1Q7LGA3 356 aa9.77□□□□□ -0.84
SPTAN1-223ENST00000630866 ABT1Q9ULW3 272 aaKnown RBP9.77□□□□□ -0.84
SPTAN1-223ENST00000630866 AFMP43652 599 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 TIMM10P62072 90 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 RPS8P62241 208 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 ASIC1P78348 528 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 MYO5CQ9NQX4 1742 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 SYCE3A1L190 88 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 CCDC175P0C221 793 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 LPIN2Q92539 896 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 DDX19AQ9NUU7 478 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 MROH5Q6ZUA9 1318 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 SYKP43405 635 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 POLR3AO14802 1390 aaPredicted RBP9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 ZSCAN12O43309 604 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 PRPF4BQ13523 1007 aaKnown RBP9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 PRKAG2Q9UGJ0 569 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 ISM2Q6H9L7 571 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 TAOK3Q9H2K8 898 aa9.77□□□□□ -0.85
SPTAN1-223ENST00000630866 TRIM75PA6NK02 468 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 HOXB7P09629 217 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 PAFAH1B1P43034 410 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 RRAGBQ5VZM2 374 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 CHST3Q7LGC8 479 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 NECAB1Q8N987 351 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 TCEANC2Q96MN5 208 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 SPAG5Q96R06 1193 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 MRVI1Q9Y6F6 885 aa9.76□□□□□ -0.85
SPTAN1-223ENST00000630866 CNGA1P29973 690 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms