RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 TSG101Q99816 390 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
COL25A1-209ENST00000622134 JCADQ9P266 1359 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 A0A1B0GUA9 196 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 SEC24BO95487 1268 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 WDR17Q8IZU2 1322 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 AMPD3Q01432 767 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 NUCB1Q02818 461 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 PRPF40BQ6NWY9 871 aaKnown RBP11.93□□□□□ -0.5
COL25A1-209ENST00000622134 C8orf76Q96K31 380 aa11.93□□□□□ -0.5
COL25A1-209ENST00000622134 NCBP1Q09161 790 aaKnown RBP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 OTUD7BQ6GQQ9 843 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 GIMAP6Q6P9H5 292 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 KIF22Q14807 665 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 SLC5A4Q9NY91 659 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 CETN1Q12798 172 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 PABPC4Q13310 644 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 WTAPQ15007 396 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 PNMA2Q9UL42 364 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 PUM3Q15397 648 aaKnown RBP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 DRC1Q96MC2 740 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 NAP1L4Q99733 375 aaKnown RBP11.92□□□□□ -0.5
COL25A1-209ENST00000622134 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
COL25A1-209ENST00000622134 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 CETN2P41208 172 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 DCAF15Q66K64 600 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 TMC6Q7Z403 805 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 CALML4Q96GE6 196 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 TMX3Q96JJ7 454 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 PPIP5K2O43314 1243 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 ZSCAN22P10073 491 aaPredicted RBP11.91□□□□□ -0.5
COL25A1-209ENST00000622134 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
COL25A1-209ENST00000622134 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 IL13P35225 146 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 GNG11P61952 73 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 PICALMQ13492 652 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 USP37Q86T82 979 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 GTF3C6Q969F1 213 aa11.91□□□□□ -0.5
COL25A1-209ENST00000622134 KIF4AO95239 1232 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 MAP2K2P36507 400 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 C2CD5Q86YS7 1000 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
COL25A1-209ENST00000622134 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 NEBLO76041 1014 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 PTGS1P23219 599 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 HSPA4P34932 840 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 DLGAP5Q15398 846 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 SLC9C2Q5TAH2 1124 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 GLT8D2Q9H1C3 349 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.9□□□□□ -0.5
COL25A1-209ENST00000622134 MKRN1Q9UHC7 482 aaKnown RBP11.9□□□□□ -0.5
COL25A1-209ENST00000622134 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 RTL9Q8NET4 1388 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 FBLN1P23142 703 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 ARHGAP27Q6ZUM4 889 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
COL25A1-209ENST00000622134 PHKG2P15735 406 aa11.9□□□□□ -0.51
COL25A1-209ENST00000622134 ANAPC15P60006 121 aa11.9□□□□□ -0.51
COL25A1-209ENST00000622134 MCM6Q14566 821 aa11.9□□□□□ -0.51
COL25A1-209ENST00000622134 CPSF2Q9P2I0 782 aaKnown RBP11.9□□□□□ -0.51
COL25A1-209ENST00000622134 PARD3Q8TEW0 1356 aa11.9□□□□□ -0.51
COL25A1-209ENST00000622134 EYA2O00167 538 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 IBSPP21815 317 aaPredicted RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 CEP112Q8N8E3 955 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 IBTKQ9P2D0 1353 aaPredicted RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 MROH5Q6ZUA9 1318 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 FERMT3Q86UX7 667 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 TEX11Q8IYF3 940 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 PAIP2Q9BPZ3 127 aaKnown RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 CSADQ9Y600 493 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 LOC102724428A0A0B4J2F2 783 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 SIK1P57059 783 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 IFIT1BQ5T764 474 aaKnown RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 VPS18Q9P253 973 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 MRPL50Q8N5N7 158 aaKnown RBP11.89□□□□□ -0.51
COL25A1-209ENST00000622134 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 FERMT2Q96AC1 680 aa11.89□□□□□ -0.51
COL25A1-209ENST00000622134 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms