RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MPNDQ8N594 471 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 LTBP4Q8N2S1 1624 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 COL22A1Q8NFW1 1626 aaPredicted RBP14.65□□□□□ -0.06
CIITA-212ENST00000618207 ZFYP08048 801 aaPredicted RBP14.65□□□□□ -0.06
CIITA-212ENST00000618207 KRT85P78386 507 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 ZNF213O14771 459 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
CIITA-212ENST00000618207 RASGRF1Q13972 1273 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 CAMK4Q16566 473 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 LPIN2Q92539 896 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 EP400Q96L91 3159 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 ANKRD36CQ5JPF3 1778 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
CIITA-212ENST00000618207 ADD2P35612 726 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
CIITA-212ENST00000618207 ERFEQ4G0M1 354 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 CCDC152Q4G0S7 254 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 MAGEB6Q8N7X4 407 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 NKX2-3Q8TAU0 364 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 TSPY26PQ9H489 355 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 AKAP11Q9UKA4 1901 aa14.64□□□□□ -0.07
CIITA-212ENST00000618207 TAF1P21675 1872 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 NTSR2O95665 410 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 SLC5A1P13866 664 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 RXRAP19793 462 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
CIITA-212ENST00000618207 ALDH8A1Q9H2A2 487 aaPredicted RBP14.63□□□□□ -0.07
CIITA-212ENST00000618207 SRP68Q9UHB9 627 aaKnown RBP14.63□□□□□ -0.07
CIITA-212ENST00000618207 CTDNEP1O95476 244 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 PDE6AP16499 860 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 SPATA5Q8NB90 893 aa14.63□□□□□ -0.07
CIITA-212ENST00000618207 NSUN7Q8NE18 718 aaKnown RBP14.63□□□□□ -0.07
CIITA-212ENST00000618207 FTOQ9C0B1 505 aaKnown RBP eCLIP14.63□□□□□ -0.07
CIITA-212ENST00000618207 GOLGA6L4A6NEF3 574 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 PRC1O43663 620 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 PDIA3P30101 505 aaKnown RBP14.62□□□□□ -0.07
CIITA-212ENST00000618207 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 AIDAQ96BJ3 306 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 SPATA32Q96LK8 384 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 ABCF2Q9UG63 623 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 CHRNDQ07001 517 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 BARGINQ6ZT62 677 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 MIGA1Q8NAN2 632 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 TMEM87AQ8NBN3 555 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 MROH5Q6ZUA9 1318 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 WNK3Q9BYP7 1800 aa14.62□□□□□ -0.07
CIITA-212ENST00000618207 PFKFB2O60825 505 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 CCDC173Q0VFZ6 552 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 CCDC183Q5T5S1 534 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 GJB4Q9NTQ9 266 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 KLF18A0A0U1RQI7 1052 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 LIG1P18858 919 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 SMARCC1Q92922 1105 aaPredicted RBP14.61□□□□□ -0.07
CIITA-212ENST00000618207 ARMT1Q9H993 441 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 TOMM22Q9NS69 142 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 SPEF2Q9C093 1822 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 NRAPQ86VF7 1730 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 NPHP1O15259 732 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 PHF14O94880 888 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 FGFR2P21802 821 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 GYG1P46976 350 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
CIITA-212ENST00000618207 ZNF652Q9Y2D9 606 aa14.61□□□□□ -0.07
CIITA-212ENST00000618207 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 ESPNB1AK53 854 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 PRKAB2O43741 272 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 TBC1D9BQ66K14 1250 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 ZSCAN25Q6NSZ9 544 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 NCOA7Q8NI08 942 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 MYH7P12883 1935 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 B4E1Z4 1266 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 GNPATO15228 680 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 MBD4O95243 580 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 UQCRFS1P1P0C7P4 283 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 CSPP1Q1MSJ5 1256 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 RRP12Q5JTH9 1297 aaKnown RBP14.6□□□□□ -0.07
CIITA-212ENST00000618207 LRP2BPQ9P2M1 347 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 USP21Q9UK80 565 aa14.6□□□□□ -0.07
CIITA-212ENST00000618207 ARID4AP29374 1257 aaPredicted RBP14.59□□□□□ -0.07
CIITA-212ENST00000618207 MCM5P33992 734 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 ANTXR2P58335 489 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 TRDNQ13061 729 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 CKAP2LQ8IYA6 745 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 NWD2Q9ULI1 1742 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 BICD2Q8TD16 824 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 NBPF3Q9H094 633 aa14.59□□□□□ -0.07
CIITA-212ENST00000618207 MAP3K12Q12852 859 aa14.58□□□□□ -0.08
CIITA-212ENST00000618207 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
CIITA-212ENST00000618207 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
CIITA-212ENST00000618207 MYL10Q9BUA6 226 aa14.58□□□□□ -0.08
CIITA-212ENST00000618207 SENP2Q9HC62 589 aa14.58□□□□□ -0.08
CIITA-212ENST00000618207 JAG2Q9Y219 1238 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms