RNA–Protein interactions for RNA: ENST00000609203.1

CLCN3P1-202, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene CLCN3P1, Length 1,944 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-202ENST00000609203 ZNF609O15014 1411 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 GNPATO15228 680 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 CIAO1O76071 339 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 RHBDL3P58872 404 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 NMIQ13287 307 aaPredicted RBP9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 SLC27A3Q5K4L6 730 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 GBP4Q96PP9 640 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 SRP68Q9UHB9 627 aaKnown RBP9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
CLCN3P1-202ENST00000609203 CDHR2Q9BYE9 1310 aa9.71□□□□□ -0.85
CLCN3P1-202ENST00000609203 LAMB2P55268 1798 aa9.71□□□□□ -0.85
CLCN3P1-202ENST00000609203 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 ERVV-1B6SEH8 477 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 GOLIM4O00461 696 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 MCM4P33991 863 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 KCNJ4P48050 445 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 IFIT5Q13325 482 aaKnown RBP9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 RAB3GAP1Q15042 981 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 ATG9AQ7Z3C6 839 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 NLRP10Q86W26 655 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 PLA2G12BQ9BX93 195 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 GPR108Q9NPR9 543 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 CCDC171Q6TFL3 1326 aa9.71□□□□□ -0.86
CLCN3P1-202ENST00000609203 RFX7Q2KHR2 1363 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 RPS6KA4O75676 772 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 SEMA3FQ13275 785 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 GSE1Q14687 1217 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 LRRC24Q50LG9 513 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 RC3H1Q5TC82 1133 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 CCDC181Q5TID7 509 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 ZNF280DQ6N043 979 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 SND1Q7KZF4 910 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 CXorf38Q8TB03 319 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 UBXN4Q92575 508 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 TNPO1Q92973 898 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 IL17RAQ96F46 866 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 FAM227BQ96M60 508 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 UPF3BQ9BZI7 483 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 METTL14Q9HCE5 456 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 NUB1Q9Y5A7 615 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 PNPLA7Q6ZV29 1317 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 CAMTA2O94983 1202 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 NUCB2P80303 420 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 NBPF9Q3BBW0 867 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 MKL1Q969V6 931 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 VTI1AQ96AJ9 217 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 HAUS7Q99871 368 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 SNX14Q9Y5W7 946 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 SCN7AQ01118 1682 aa9.7□□□□□ -0.86
CLCN3P1-202ENST00000609203 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 A0A0D9SFI3 127 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 A0A1B0GUL7 405 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 IRS4O14654 1257 aaPredicted RBP9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 BAG6P46379 1132 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 CTSWP56202 376 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 PTH1RQ03431 593 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 SETDB1Q15047 1291 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 COL23A1Q86Y22 540 aaPredicted RBP9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 PMM1Q92871 262 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 AKAP2Q9Y2D5 859 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 DDX60Q8IY21 1712 aaKnown RBP9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 UBN2Q6ZU65 1347 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 MED23Q9ULK4 1368 aa9.69□□□□□ -0.86
CLCN3P1-202ENST00000609203 ANKRD18BA2A2Z9 1011 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 CSF1RP07333 972 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 TIMM10P62072 90 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 SYNE4Q8N205 404 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 AK7Q96M32 723 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 PPP1R1BQ9UD71 204 aaPredicted RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 CCDC194A0A1B0GVG4 234 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 GOLGA6L22H0YM25 854 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 PDE8AO60658 829 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 PARNO95453 639 aaKnown RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 ITGA6P23229 1130 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 CCDC158Q5M9N0 1113 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 RNF20Q5VTR2 975 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 USPL1Q5W0Q7 1092 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 DDX46Q7L014 1031 aaKnown RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 ZGPATQ8N5A5 531 aaKnown RBP9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
CLCN3P1-202ENST00000609203 ARAP2Q8WZ64 1704 aa9.67□□□□□ -0.86
CLCN3P1-202ENST00000609203 LAMA4Q16363 1823 aa9.67□□□□□ -0.86
CLCN3P1-202ENST00000609203 GOLGA6CA6NDK9 693 aa9.67□□□□□ -0.86
CLCN3P1-202ENST00000609203 GOLGA6BA6NDN3 693 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms