RNA–Protein interactions for RNA: ENST00000604864.5

NEB-219, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-219ENST00000604864 CYLC1P35663 651 aaPredicted RBP3.82□□□□□ -1.8
NEB-219ENST00000604864 PLXNC1O60486 1568 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 RASSF10A6NK89 507 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 STK38Q15208 465 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 SEPT10Q9P0V9 454 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 XPCQ01831 940 aaPredicted RBP3.82□□□□□ -1.8
NEB-219ENST00000604864 FAM200AQ8TCP9 573 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 NSRP1Q9H0G5 558 aaKnown RBP3.82□□□□□ -1.8
NEB-219ENST00000604864 ZFXP17010 805 aaPredicted RBP3.82□□□□□ -1.8
NEB-219ENST00000604864 PPP1R7Q15435 360 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 STX10O60499 249 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 PRLRP16471 622 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 CCNI2Q6ZMN8 369 aaPredicted RBP3.82□□□□□ -1.8
NEB-219ENST00000604864 TCP11L2Q8N4U5 519 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 PTPN23Q9H3S7 1636 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 BRD1O95696 1058 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 TROVE2P10155 538 aaKnown RBP eCLIP3.82□□□□□ -1.8
NEB-219ENST00000604864 MTHFSP49914 203 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
NEB-219ENST00000604864 SCINQ9Y6U3 715 aa3.82□□□□□ -1.8
NEB-219ENST00000604864 ZNF365Q70YC5 407 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 ARL2BPQ9Y2Y0 163 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 TUBA3CQ13748 450 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 TTC27Q6P3X3 843 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CCDC150Q8NCX0 1101 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 NEK1Q96PY6 1258 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 IL9RQ01113 521 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 FKBP5Q13451 457 aaPredicted RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 DDX42Q86XP3 938 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEB-219ENST00000604864 MROH2BQ7Z745 1585 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 GNA14O95837 355 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 SSRP1Q08945 709 aaKnown RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 PIBF1Q8WXW3 757 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 RASAL2Q9UJF2 1139 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 ATP5JP18859 108 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 ZFYVE27Q5T4F4 411 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 ATP6V0A1Q93050 837 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 DGCR14Q96DF8 476 aaKnown RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 PARD6BQ9BYG5 372 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 FRMD3A2A2Y4 597 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 SPAG1Q07617 926 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 DIXDC1Q155Q3 683 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 SCOCQ9UIL1 159 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 RABGAP1Q9Y3P9 1069 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 GOLGA8QA0A0J9YX86 632 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 GOLGA8OA6NCC3 632 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 GOLGA8NF8WBI6 632 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 ICE2Q659A1 982 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 VSIG1Q86XK7 387 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 PBKQ96KB5 322 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 NEUROD6Q96NK8 337 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 TACC3Q9Y6A5 838 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 FAM114A2Q9NRY5 505 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CMA1P23946 247 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 SYCP2LQ5T4T6 812 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 DHX32Q7L7V1 743 aaKnown RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 PPP1R1BQ9UD71 204 aaPredicted RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 SHROOM2Q13796 1616 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 TANGO6Q9C0B7 1094 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 SAR1BQ9Y6B6 198 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CLTAP09496 248 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CCDC93Q567U6 631 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CMTM5Q96DZ9 223 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 PAIP2BQ9ULR5 123 aaKnown RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 GAPVD1Q14C86 1478 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 RANBP1P43487 201 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 NCAPGQ9BPX3 1015 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 KCNG4Q8TDN1 519 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CACTINQ8WUQ7 758 aaKnown RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 TBC1D32Q96NH3 1257 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 HVCN1Q96D96 273 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 TMEM232C9JQI7 657 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 FOXD4L6Q3SYB3 417 aaPredicted RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 FOXD4L3Q6VB84 417 aaPredicted RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 ATP2A3Q93084 1043 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 MRGBPQ9NV56 204 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 RCOR1Q9UKL0 485 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 PLEKHH1Q9ULM0 1364 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 IGSF3O75054 1194 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 AMPHP49418 695 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 RPS6KA1Q15418 735 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 GRIN2BQ13224 1484 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 EPC1Q9H2F5 836 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 GRIN1Q05586 938 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CCDC144BQ3MJ40 725 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 CCDC129Q6ZRS4 1044 aa3.81□□□□□ -1.8
NEB-219ENST00000604864 HELBQ8NG08 1087 aaPredicted RBP3.81□□□□□ -1.8
NEB-219ENST00000604864 IGHDP01880 384 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 UBA7P41226 1012 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 PITPNM3Q9BZ71 974 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 TEDDM1Q5T9Z0 273 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 ACTR5Q9H9F9 607 aaPredicted RBP3.8□□□□□ -1.8
NEB-219ENST00000604864 HNRNPCL1O60812 293 aaKnown RBP3.8□□□□□ -1.8
NEB-219ENST00000604864 CCND1P24385 295 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 SYCE1Q8N0S2 351 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 CDCA7LQ96GN5 454 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 LNPKQ9C0E8 428 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 NSD2O96028 1365 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 VPS53Q5VIR6 699 aa3.8□□□□□ -1.8
NEB-219ENST00000604864 GSDMBQ8TAX9 411 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms