RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 TMOD3Q9NYL9 352 aa15.21■□□□□ 0.02
SRGAP2-209ENST00000604247 SPEF2Q9C093 1822 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 EVCP57679 992 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 IQCB1Q15051 598 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 IMMTQ16891 758 aaKnown RBP15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 GJB4Q9NTQ9 266 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 PCCAP05165 728 aaPredicted RBP15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 CSF1RP07333 972 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 GPTP24298 496 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 ARID3AQ99856 593 aa15.2■□□□□ 0.02
SRGAP2-209ENST00000604247 PRC1O43663 620 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 TRIM28Q13263 835 aaKnown RBP15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 HLFQ16534 295 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 CCDC73Q6ZRK6 1079 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 ZBTB38Q8NAP3 1195 aaPredicted RBP15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 POLR3DP05423 398 aaPredicted RBP15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 FBXL16Q8N461 479 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 APPBP2Q92624 585 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 MAP7D2Q96T17 732 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 PCDHA7Q9UN72 937 aa15.19■□□□□ 0.02
SRGAP2-209ENST00000604247 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 KLF18A0A0U1RQI7 1052 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 ANTXR2P58335 489 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 CCDC144BQ3MJ40 725 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 ZSCAN25Q6NSZ9 544 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 CCDC144CPQ8IYA2 1237 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 MB21D2Q8IYB1 491 aaPredicted RBP15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 DISP2A7MBM2 1401 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 CTAGE5O15320 804 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 GPAA1O43292 621 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 KINO60870 393 aaKnown RBP15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 MCAMP43121 646 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 FAM160A1Q05DH4 1040 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 GREM2Q9H772 168 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 CLIP2Q9UDT6 1046 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 RIPOR2Q9Y4F9 1068 aa15.18■□□□□ 0.02
SRGAP2-209ENST00000604247 GTF2F1P35269 517 aaKnown RBP eCLIP15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 ATP2B3Q16720 1220 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 CACTINQ8WUQ7 758 aaKnown RBP15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 PLA2G12BQ9BX93 195 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 ZNF213O14771 459 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 CAVIN2O95810 425 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 ITGA6P23229 1130 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 STX1AQ16623 288 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 ZNF710Q8N1W2 664 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 TTLL11Q8NHH1 800 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 C8orf76Q96K31 380 aa15.17■□□□□ 0.02
SRGAP2-209ENST00000604247 GIGYF2Q6Y7W6 1299 aaKnown RBP15.16■□□□□ 0.02
SRGAP2-209ENST00000604247 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
SRGAP2-209ENST00000604247 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
SRGAP2-209ENST00000604247 RALYLQ86SE5 291 aaKnown RBP15.16■□□□□ 0.02
SRGAP2-209ENST00000604247 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
SRGAP2-209ENST00000604247 RIOK3O14730 519 aaKnown RBP15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 ADALQ6DHV7 355 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 NLRP10Q86W26 655 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 FMR1NBQ8N0W7 255 aaPredicted RBP15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 FBXO18Q8NFZ0 1043 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 NBPF3Q9H094 633 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 AKAP11Q9UKA4 1901 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 MYO5AQ9Y4I1 1855 aaKnown RBP15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 RIC1Q4ADV7 1423 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 STARD3NLO95772 234 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 NDUFA8P51970 172 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 SDF4Q9BRK5 362 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
SRGAP2-209ENST00000604247 MYH7P12883 1935 aa15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 BECN2A8MW95 431 aa15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 CPLX1O14810 134 aa15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 MRPS27Q92552 414 aaKnown RBP15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 TEX13AQ9BXU3 409 aaPredicted RBP15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
SRGAP2-209ENST00000604247 KIF28PB7ZC32 967 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms