RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
HIF3A-219ENST00000600879 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
HIF3A-219ENST00000600879 CWF19L2Q2TBE0 894 aaKnown RBP12.82□□□□□ -0.36
HIF3A-219ENST00000600879 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
HIF3A-219ENST00000600879 SLC17A8Q8NDX2 589 aa12.82□□□□□ -0.36
HIF3A-219ENST00000600879 TRIOBPQ9H2D6 2365 aa12.82□□□□□ -0.36
HIF3A-219ENST00000600879 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
HIF3A-219ENST00000600879 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-219ENST00000600879 DDX58O95786 925 aaKnown RBP12.81□□□□□ -0.36
HIF3A-219ENST00000600879 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
HIF3A-219ENST00000600879 KCNJ4P48050 445 aa12.81□□□□□ -0.36
HIF3A-219ENST00000600879 C8orf58Q8NAV2 365 aa12.81□□□□□ -0.36
HIF3A-219ENST00000600879 OPTNQ96CV9 577 aa12.81□□□□□ -0.36
HIF3A-219ENST00000600879 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
HIF3A-219ENST00000600879 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
HIF3A-219ENST00000600879 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
HIF3A-219ENST00000600879 COL1A1P02452 1464 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-219ENST00000600879 RALBP1Q15311 655 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 MAP3K11Q16584 847 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 DPF3Q92784 378 aa12.8□□□□□ -0.36
HIF3A-219ENST00000600879 PRMT6Q96LA8 375 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-219ENST00000600879 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 ZNF853P0CG23 659 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 RASA3Q14644 834 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 TAF1CQ15572 869 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-219ENST00000600879 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-219ENST00000600879 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
HIF3A-219ENST00000600879 TAF5LO75529 589 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 ITGA6P23229 1130 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
HIF3A-219ENST00000600879 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
HIF3A-219ENST00000600879 CHRNDQ07001 517 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 MTFR1Q15390 333 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 KSR2Q6VAB6 950 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 SHISA4Q96DD7 197 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
HIF3A-219ENST00000600879 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.36
HIF3A-219ENST00000600879 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-219ENST00000600879 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 MYO1BO43795 1136 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 MMP14P50281 582 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 GNAI1P63096 354 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 NEXNQ0ZGT2 675 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 CCL15Q16663 113 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 ANKRD13AQ8IZ07 590 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 TSPYL6Q8N831 410 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 PPP2R3BQ9Y5P8 575 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.37
HIF3A-219ENST00000600879 CEP290O15078 2479 aa12.77□□□□□ -0.37
HIF3A-219ENST00000600879 MYH3P11055 1940 aa12.76□□□□□ -0.37
HIF3A-219ENST00000600879 SOX1O00570 391 aaPredicted RBP12.76□□□□□ -0.37
HIF3A-219ENST00000600879 APAF1O14727 1248 aa12.76□□□□□ -0.37
HIF3A-219ENST00000600879 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
HIF3A-219ENST00000600879 H7C1W4 665 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 VGLL4Q14135 290 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.75□□□□□ -0.37
HIF3A-219ENST00000600879 G2E3Q7L622 706 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 MTMR14Q8NCE2 650 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 OTOFQ9HC10 1997 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 ZFYVE28Q9HCC9 887 aa12.75□□□□□ -0.37
HIF3A-219ENST00000600879 IRS2Q9Y4H2 1338 aa12.74□□□□□ -0.37
HIF3A-219ENST00000600879 TCP10L2B9ZVM9 353 aa12.74□□□□□ -0.37
HIF3A-219ENST00000600879 CTGFP29279 349 aa12.74□□□□□ -0.37
HIF3A-219ENST00000600879 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
HIF3A-219ENST00000600879 TMEM39BQ9GZU3 492 aa12.74□□□□□ -0.37
HIF3A-219ENST00000600879 TDRD3Q9H7E2 651 aaKnown RBP12.74□□□□□ -0.37
HIF3A-219ENST00000600879 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
HIF3A-219ENST00000600879 LAMB1P07942 1786 aa12.74□□□□□ -0.37
HIF3A-219ENST00000600879 PLIN1O60240 522 aa12.73□□□□□ -0.37
HIF3A-219ENST00000600879 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-219ENST00000600879 GCKRQ14397 625 aa12.73□□□□□ -0.37
HIF3A-219ENST00000600879 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
HIF3A-219ENST00000600879 STK31Q9BXU1 1019 aa12.73□□□□□ -0.37
HIF3A-219ENST00000600879 ZNF70Q9UC06 446 aaPredicted RBP12.73□□□□□ -0.37
HIF3A-219ENST00000600879 ECM29Q5VYK3 1845 aa12.73□□□□□ -0.37
HIF3A-219ENST00000600879 COL6A3P12111 3177 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 CACNB3P54284 484 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 CASP7P55210 303 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
HIF3A-219ENST00000600879 TEPSINQ96N21 525 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 CPA4Q9UI42 421 aa12.72□□□□□ -0.37
HIF3A-219ENST00000600879 BTBD19C9JJ37 291 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms