RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 ARXQ96QS3 562 aa7.95□□□□□ -1.14
ZNF540-204ENST00000586792 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-204ENST00000586792 BSDC1Q9NW68 430 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-204ENST00000586792 ARL4DP49703 201 aa7.94□□□□□ -1.14
ZNF540-204ENST00000586792 GLMNQ92990 594 aa7.94□□□□□ -1.14
ZNF540-204ENST00000586792 FGD5Q6ZNL6 1462 aa7.94□□□□□ -1.14
ZNF540-204ENST00000586792 CUX1P39880 1505 aa7.93□□□□□ -1.14
ZNF540-204ENST00000586792 TARBP1Q13395 1621 aaKnown RBP7.93□□□□□ -1.14
ZNF540-204ENST00000586792 NCAPG2Q86XI2 1143 aa7.93□□□□□ -1.14
ZNF540-204ENST00000586792 ETFBKMTQ8IXQ9 262 aa7.93□□□□□ -1.14
ZNF540-204ENST00000586792 ZNF608Q9ULD9 1512 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-204ENST00000586792 WDR97A6NE52 1622 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 A6NJR5 290 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 PAOXQ6QHF9 649 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 CEP120Q8N960 986 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 FAM200AQ8TCP9 573 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 POP1Q99575 1024 aaKnown RBP7.92□□□□□ -1.14
ZNF540-204ENST00000586792 PPP1R12CQ9BZL4 782 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 ABI2Q9NYB9 513 aaPredicted RBP7.92□□□□□ -1.14
ZNF540-204ENST00000586792 SOGA1O94964 1423 aa7.92□□□□□ -1.14
ZNF540-204ENST00000586792 CYP26A1O43174 497 aa7.91□□□□□ -1.14
ZNF540-204ENST00000586792 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-204ENST00000586792 NLRP12P59046 1061 aa7.91□□□□□ -1.14
ZNF540-204ENST00000586792 SGO2Q562F6 1265 aa7.91□□□□□ -1.14
ZNF540-204ENST00000586792 NUTM2GQ5VZR2 741 aa7.91□□□□□ -1.14
ZNF540-204ENST00000586792 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
ZNF540-204ENST00000586792 COL26A1Q96A83 441 aa7.91□□□□□ -1.14
ZNF540-204ENST00000586792 RAD54L2Q9Y4B4 1467 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 WRNQ14191 1432 aaPredicted RBP eCLIP7.9□□□□□ -1.14
ZNF540-204ENST00000586792 FAM95CA0A1B0GW59 222 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 NFKBIBQ15653 356 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 FBLN7Q53RD9 439 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 C16orf46Q6P387 395 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
ZNF540-204ENST00000586792 ZMYND15Q9H091 742 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 CYP4F12Q9HCS2 524 aa7.9□□□□□ -1.14
ZNF540-204ENST00000586792 BIVM-ERCC5R4GMW8 1640 aa7.89□□□□□ -1.15
ZNF540-204ENST00000586792 DBX1A6NMT0 343 aa7.89□□□□□ -1.15
ZNF540-204ENST00000586792 FLCNQ8NFG4 579 aa7.89□□□□□ -1.15
ZNF540-204ENST00000586792 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
ZNF540-204ENST00000586792 BIN1O00499 593 aa7.88□□□□□ -1.15
ZNF540-204ENST00000586792 USP11P51784 963 aa7.88□□□□□ -1.15
ZNF540-204ENST00000586792 C19orf57Q0VDD7 668 aa7.88□□□□□ -1.15
ZNF540-204ENST00000586792 FKBP5Q13451 457 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-204ENST00000586792 NFXL1Q6ZNB6 911 aa7.88□□□□□ -1.15
ZNF540-204ENST00000586792 SMG8Q8ND04 991 aaKnown RBP7.88□□□□□ -1.15
ZNF540-204ENST00000586792 SLC7A3Q8WY07 619 aa7.88□□□□□ -1.15
ZNF540-204ENST00000586792 SUGCTQ9HAC7 445 aa7.88□□□□□ -1.15
ZNF540-204ENST00000586792 AQRO60306 1485 aaKnown RBP eCLIP7.87□□□□□ -1.15
ZNF540-204ENST00000586792 PBRM1Q86U86 1689 aa7.87□□□□□ -1.15
ZNF540-204ENST00000586792 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-204ENST00000586792 YIPF2Q9BWQ6 316 aa7.87□□□□□ -1.15
ZNF540-204ENST00000586792 CHD1O14646 1710 aa7.86□□□□□ -1.15
ZNF540-204ENST00000586792 TDRD9Q8NDG6 1382 aaKnown RBP7.86□□□□□ -1.15
ZNF540-204ENST00000586792 SYNJ1O43426 1573 aa7.86□□□□□ -1.15
ZNF540-204ENST00000586792 ZAP70P43403 619 aa7.86□□□□□ -1.15
ZNF540-204ENST00000586792 COL19A1Q14993 1142 aa7.86□□□□□ -1.15
ZNF540-204ENST00000586792 TBC1D32Q96NH3 1257 aa7.86□□□□□ -1.15
ZNF540-204ENST00000586792 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
ZNF540-204ENST00000586792 LCE4AQ5TA78 99 aa7.85□□□□□ -1.15
ZNF540-204ENST00000586792 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
ZNF540-204ENST00000586792 PDE12Q6L8Q7 609 aaKnown RBP7.85□□□□□ -1.15
ZNF540-204ENST00000586792 ZAR1Q86SH2 424 aa7.85□□□□□ -1.15
ZNF540-204ENST00000586792 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
ZNF540-204ENST00000586792 PAK6Q9NQU5 681 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-204ENST00000586792 GRIN2BQ13224 1484 aa7.85□□□□□ -1.15
ZNF540-204ENST00000586792 ABCA10Q8WWZ4 1543 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 SNAPC4Q5SXM2 1469 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 MAGI1Q96QZ7 1491 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-204ENST00000586792 TIAF1O95411 115 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 CYP2E1P05181 493 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-204ENST00000586792 PKN1Q16512 942 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 ZNF648Q5T619 568 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-204ENST00000586792 SAP130Q9H0E3 1048 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 ABCA5Q8WWZ7 1642 aa7.84□□□□□ -1.15
ZNF540-204ENST00000586792 FARP2O94887 1054 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-204ENST00000586792 CYP27A1Q02318 531 aa7.83□□□□□ -1.16
ZNF540-204ENST00000586792 SWI5Q1ZZU3 235 aa7.83□□□□□ -1.16
ZNF540-204ENST00000586792 EXOSC6Q5RKV6 272 aaKnown RBP7.83□□□□□ -1.16
ZNF540-204ENST00000586792 GPR152Q8TDT2 470 aa7.83□□□□□ -1.16
ZNF540-204ENST00000586792 FBLIM1Q8WUP2 373 aa7.83□□□□□ -1.16
ZNF540-204ENST00000586792 PDE2AO00408 941 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-204ENST00000586792 EIF4EBP3O60516 100 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-204ENST00000586792 PAPLNO95428 1278 aa7.82□□□□□ -1.16
ZNF540-204ENST00000586792 ELP3Q9H9T3 547 aa7.82□□□□□ -1.16
ZNF540-204ENST00000586792 SALL4Q9UJQ4 1053 aa7.82□□□□□ -1.16
ZNF540-204ENST00000586792 ZNF124Q15973 351 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 SHISA5Q8N114 240 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 EZH1Q92800 747 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-204ENST00000586792 PRIMPOLQ96LW4 560 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 KRTAP4-11Q9BYQ6 195 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 PRKAG2Q9UGJ0 569 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 SOX13Q9UN79 622 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 SYNJ2O15056 1496 aa7.81□□□□□ -1.16
ZNF540-204ENST00000586792 NFKBIEO00221 500 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 TNFRSF10BO14763 440 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 RPLP1P05386 114 aaKnown RBP7.8□□□□□ -1.16
ZNF540-204ENST00000586792 RFX1P22670 979 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 ADMP35318 185 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms