RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 WASHC4Q2M389 1173 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 PRR5LQ6MZQ0 368 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 CDC5LQ99459 802 aaKnown RBP26.93■■□□□ 1.9
CCDC47-204ENST00000582252 CTNNA3Q9UI47 895 aa26.93■■□□□ 1.9
CCDC47-204ENST00000582252 MCAMP43121 646 aa26.92■■□□□ 1.9
CCDC47-204ENST00000582252 ST5P78524 1137 aa26.92■■□□□ 1.9
CCDC47-204ENST00000582252 SCARF1Q14162 830 aa26.92■■□□□ 1.9
CCDC47-204ENST00000582252 GOLGA6L3A6NEY3 463 aa26.91■■□□□ 1.9
CCDC47-204ENST00000582252 CCDC102BQ68D86 513 aa26.91■■□□□ 1.9
CCDC47-204ENST00000582252 UPF1Q92900 1129 aaKnown RBP eCLIP26.91■■□□□ 1.9
CCDC47-204ENST00000582252 LAMA4Q16363 1823 aa26.91■■□□□ 1.9
CCDC47-204ENST00000582252 LARGE1O95461 756 aa26.9■■□□□ 1.9
CCDC47-204ENST00000582252 ME3Q16798 604 aa26.9■■□□□ 1.9
CCDC47-204ENST00000582252 LARP6Q9BRS8 491 aaKnown RBP26.9■■□□□ 1.9
CCDC47-204ENST00000582252 LMBRD1Q9NUN5 540 aa26.9■■□□□ 1.9
CCDC47-204ENST00000582252 TPCN1Q9ULQ1 816 aa26.9■■□□□ 1.9
CCDC47-204ENST00000582252 M0R2C6 588 aa26.9■■□□□ 1.9
CCDC47-204ENST00000582252 OSBP2Q969R2 916 aa26.9■■□□□ 1.9
CCDC47-204ENST00000582252 TAF1P21675 1872 aa26.89■■□□□ 1.9
CCDC47-204ENST00000582252 C3orf67Q6ZVT6 689 aa26.89■■□□□ 1.9
CCDC47-204ENST00000582252 SEC31BQ9NQW1 1179 aa26.89■■□□□ 1.9
CCDC47-204ENST00000582252 ATP6V1DQ9Y5K8 247 aa26.89■■□□□ 1.9
CCDC47-204ENST00000582252 STX6O43752 255 aa26.88■■□□□ 1.89
CCDC47-204ENST00000582252 TOB2Q14106 344 aaPredicted RBP26.88■■□□□ 1.89
CCDC47-204ENST00000582252 TAF6LQ9Y6J9 622 aa26.88■■□□□ 1.89
CCDC47-204ENST00000582252 MMP10P09238 476 aa26.87■■□□□ 1.89
CCDC47-204ENST00000582252 GJB2P29033 226 aa26.87■■□□□ 1.89
CCDC47-204ENST00000582252 FOXD4L5Q5VV16 416 aaPredicted RBP26.87■■□□□ 1.89
CCDC47-204ENST00000582252 CCDC24Q8N4L8 307 aa26.87■■□□□ 1.89
CCDC47-204ENST00000582252 FOXD4L4Q8WXT5 416 aaPredicted RBP26.87■■□□□ 1.89
CCDC47-204ENST00000582252 PARP3Q9Y6F1 533 aa26.87■■□□□ 1.89
CCDC47-204ENST00000582252 ZSCAN22P10073 491 aaPredicted RBP26.87■■□□□ 1.89
CCDC47-204ENST00000582252 PHKA1P46020 1223 aa26.87■■□□□ 1.89
CCDC47-204ENST00000582252 ANKRD31Q8N7Z5 1873 aa26.86■■□□□ 1.89
CCDC47-204ENST00000582252 ADD2P35612 726 aa26.86■■□□□ 1.89
CCDC47-204ENST00000582252 SLFNL1Q499Z3 407 aa26.86■■□□□ 1.89
CCDC47-204ENST00000582252 DHX32Q7L7V1 743 aaKnown RBP26.86■■□□□ 1.89
CCDC47-204ENST00000582252 PRPF40AO75400 957 aaKnown RBP26.85■■□□□ 1.89
CCDC47-204ENST00000582252 PDCP20941 246 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 SYT1P21579 422 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 UBE3CQ15386 1083 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 MSL1Q68DK7 614 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 HELBQ8NG08 1087 aaPredicted RBP26.85■■□□□ 1.89
CCDC47-204ENST00000582252 DOCK2Q92608 1830 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 FSD2A1L4K1 749 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 MBD3O95983 291 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 FGD1P98174 961 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 IMMTQ16891 758 aaKnown RBP26.85■■□□□ 1.89
CCDC47-204ENST00000582252 PI16Q6UXB8 463 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 ANKRD18AQ8IVF6 992 aa26.85■■□□□ 1.89
CCDC47-204ENST00000582252 Q6ZUG5 572 aa26.84■■□□□ 1.89
CCDC47-204ENST00000582252 SLC16A10Q8TF71 515 aa26.84■■□□□ 1.89
CCDC47-204ENST00000582252 CHMP4CQ96CF2 233 aa26.84■■□□□ 1.89
CCDC47-204ENST00000582252 NECAB1Q8N987 351 aa26.83■■□□□ 1.89
CCDC47-204ENST00000582252 TCEANC2Q96MN5 208 aa26.83■■□□□ 1.89
CCDC47-204ENST00000582252 A0A1B0GUL6 1792 aa26.83■■□□□ 1.89
CCDC47-204ENST00000582252 E7EWF7 191 aa26.82■■□□□ 1.88
CCDC47-204ENST00000582252 GPAA1O43292 621 aa26.82■■□□□ 1.88
CCDC47-204ENST00000582252 SLC9C2Q5TAH2 1124 aa26.82■■□□□ 1.88
CCDC47-204ENST00000582252 SPATA5Q8NB90 893 aa26.82■■□□□ 1.88
CCDC47-204ENST00000582252 CHRNDQ07001 517 aa26.82■■□□□ 1.88
CCDC47-204ENST00000582252 ST3GAL1Q11201 340 aa26.82■■□□□ 1.88
CCDC47-204ENST00000582252 IDH1O75874 414 aaKnown RBP26.81■■□□□ 1.88
CCDC47-204ENST00000582252 F13A1P00488 732 aa26.81■■□□□ 1.88
CCDC47-204ENST00000582252 CRY2Q49AN0 593 aa26.81■■□□□ 1.88
CCDC47-204ENST00000582252 STOX1Q6ZVD7 989 aa26.81■■□□□ 1.88
CCDC47-204ENST00000582252 PUS7LQ9H0K6 701 aaKnown RBP26.81■■□□□ 1.88
CCDC47-204ENST00000582252 PIH1D3Q9NQM4 214 aaKnown RBP26.81■■□□□ 1.88
CCDC47-204ENST00000582252 NCLP19338 710 aaKnown RBP26.8■■□□□ 1.88
CCDC47-204ENST00000582252 MAP3K12Q12852 859 aa26.8■■□□□ 1.88
CCDC47-204ENST00000582252 BRIP1Q9BX63 1249 aa26.8■■□□□ 1.88
CCDC47-204ENST00000582252 MYO5AQ9Y4I1 1855 aaKnown RBP26.8■■□□□ 1.88
CCDC47-204ENST00000582252 COL4A1P02462 1669 aa26.8■■□□□ 1.88
CCDC47-204ENST00000582252 MRE11P49959 708 aa26.79■■□□□ 1.88
CCDC47-204ENST00000582252 GTF3C6Q969F1 213 aa26.79■■□□□ 1.88
CCDC47-204ENST00000582252 BSDC1Q9NW68 430 aaPredicted RBP26.79■■□□□ 1.88
CCDC47-204ENST00000582252 CSPP1Q1MSJ5 1256 aa26.79■■□□□ 1.88
CCDC47-204ENST00000582252 KLRG2A4D1S0 409 aaPredicted RBP26.78■■□□□ 1.88
CCDC47-204ENST00000582252 PDE6AP16499 860 aa26.78■■□□□ 1.88
CCDC47-204ENST00000582252 EXOSC10Q01780 885 aaKnown RBP26.78■■□□□ 1.88
CCDC47-204ENST00000582252 RPGRQ92834 1020 aaKnown RBP26.78■■□□□ 1.88
CCDC47-204ENST00000582252 AGXT2Q9BYV1 514 aa26.78■■□□□ 1.88
CCDC47-204ENST00000582252 RPS8P62241 208 aaKnown RBP26.77■■□□□ 1.88
CCDC47-204ENST00000582252 COL9A3Q14050 684 aaPredicted RBP26.77■■□□□ 1.88
CCDC47-204ENST00000582252 UBE4AQ14139 1066 aa26.77■■□□□ 1.88
CCDC47-204ENST00000582252 LARP1BQ659C4 914 aaKnown RBP26.77■■□□□ 1.88
CCDC47-204ENST00000582252 CELF1Q92879 486 aaKnown RBP26.77■■□□□ 1.88
CCDC47-204ENST00000582252 BRF1Q92994 677 aa26.77■■□□□ 1.88
CCDC47-204ENST00000582252 PDGFDQ9GZP0 370 aaPredicted RBP26.77■■□□□ 1.88
CCDC47-204ENST00000582252 GNL3LQ9NVN8 582 aaKnown RBP26.77■■□□□ 1.88
CCDC47-204ENST00000582252 ZNF532Q9HCE3 1301 aa26.77■■□□□ 1.88
CCDC47-204ENST00000582252 ZNF213O14771 459 aa26.76■■□□□ 1.88
CCDC47-204ENST00000582252 FGAP02671 866 aa26.76■■□□□ 1.88
CCDC47-204ENST00000582252 RASGRF1Q13972 1273 aa26.76■■□□□ 1.88
CCDC47-204ENST00000582252 FBXL16Q8N461 479 aa26.76■■□□□ 1.88
CCDC47-204ENST00000582252 TMEM87AQ8NBN3 555 aa26.76■■□□□ 1.88
CCDC47-204ENST00000582252 MTMR6Q9Y217 621 aa26.76■■□□□ 1.88
CCDC47-204ENST00000582252 STK3Q13188 491 aa26.76■■□□□ 1.87
CCDC47-204ENST00000582252 LLPHQ9BRT6 129 aaKnown RBP26.76■■□□□ 1.87
CCDC47-204ENST00000582252 GRAPQ13588 217 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms