RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 CCDC84Q86UT8 332 aaPredicted RBP6.81□□□□□ -1.32
KRT39-202ENST00000578029 TRIM42Q8IWZ5 723 aa6.81□□□□□ -1.32
KRT39-202ENST00000578029 BHMTQ93088 406 aa6.81□□□□□ -1.32
KRT39-202ENST00000578029 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
KRT39-202ENST00000578029 ZFP42Q96MM3 310 aa6.81□□□□□ -1.32
KRT39-202ENST00000578029 DNMT3LQ9UJW3 386 aa6.81□□□□□ -1.32
KRT39-202ENST00000578029 SENP3-EIF4A1A0A087X0R7 540 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 ENPP3O14638 875 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 TRPA1O75762 1119 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
KRT39-202ENST00000578029 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 RNF187Q5TA31 235 aaPredicted RBP6.8□□□□□ -1.32
KRT39-202ENST00000578029 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 NSUN5Q96P11 429 aaKnown RBP6.8□□□□□ -1.32
KRT39-202ENST00000578029 DEPDC7Q96QD5 511 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 ZNF576Q9H609 170 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 STRN4Q9NRL3 753 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 TMEM39AQ9NV64 488 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 SNTG2Q9NY99 539 aa6.8□□□□□ -1.32
KRT39-202ENST00000578029 FAM187AA6NFU0 413 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 NFKBIEO00221 500 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 PDE2AO00408 941 aaPredicted RBP6.79□□□□□ -1.32
KRT39-202ENST00000578029 NRG2O14511 850 aaPredicted RBP6.79□□□□□ -1.32
KRT39-202ENST00000578029 MAN1A2O60476 641 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 THBS1P07996 1170 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 CRKP46108 304 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
KRT39-202ENST00000578029 EIF6P56537 245 aaKnown RBP6.79□□□□□ -1.32
KRT39-202ENST00000578029 PPP2R3AQ06190 1150 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 UBAP2LQ14157 1087 aaKnown RBP6.79□□□□□ -1.32
KRT39-202ENST00000578029 PTPROQ16827 1216 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 SHDQ96IW2 340 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 CRBNQ96SW2 442 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 LRRC3Q9BY71 257 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
KRT39-202ENST00000578029 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
KRT39-202ENST00000578029 BNIP3LO60238 219 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 F13A1P00488 732 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 MCM4P33991 863 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 ZNF165P49910 485 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 SIK1P57059 783 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 IGBP1P78318 339 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 GPLD1P80108 840 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 MPP2Q14168 576 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 RASA3Q14644 834 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 PCSK7Q16549 785 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 CWF19L2Q2TBE0 894 aaKnown RBP6.78□□□□□ -1.32
KRT39-202ENST00000578029 CCDC81Q6ZN84 652 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 OR6P1Q8NGX9 317 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 ZCRB1Q8TBF4 217 aaKnown RBP6.78□□□□□ -1.32
KRT39-202ENST00000578029 GATAD2BQ8WXI9 593 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
KRT39-202ENST00000578029 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 PBX4Q9BYU1 374 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 NDFIP2Q9NV92 336 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 CYP8B1Q9UNU6 501 aa6.78□□□□□ -1.32
KRT39-202ENST00000578029 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 LCE2BO14633 110 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 TLR3O15455 904 aaKnown RBP6.77□□□□□ -1.33
KRT39-202ENST00000578029 PAGE1O75459 146 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 GHRHP01286 108 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 CHMP4BP1P59074 171 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 FAAP100Q0VG06 881 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 BNC2Q6ZN30 1099 aaPredicted RBP6.77□□□□□ -1.33
KRT39-202ENST00000578029 TRPM4Q8TD43 1214 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
KRT39-202ENST00000578029 KCNB2Q92953 911 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 GMCL1Q96IK5 515 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 HHIPQ96QV1 700 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 BRINP2Q9C0B6 783 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 CCDC113Q9H0I3 377 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 PPT2Q9UMR5 302 aa6.77□□□□□ -1.33
KRT39-202ENST00000578029 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
KRT39-202ENST00000578029 IMPDH2P12268 514 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 NME2P22392 152 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 GIPRP48546 466 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 LRRC14Q15048 493 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 FAM182BQ5T319 152 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 RAB44Q7Z6P3 723 aaPredicted RBP6.76□□□□□ -1.33
KRT39-202ENST00000578029 TRIM22Q8IYM9 498 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 BSNDQ8WZ55 320 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 ABHD17AQ96GS6 310 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 RASSF4Q9H2L5 321 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 CLEC4MQ9H2X3 399 aaPredicted RBP6.76□□□□□ -1.33
KRT39-202ENST00000578029 ATXN7L1Q9ULK2 861 aaPredicted RBP6.76□□□□□ -1.33
KRT39-202ENST00000578029 PCDHB5Q9Y5E4 795 aa6.76□□□□□ -1.33
KRT39-202ENST00000578029 FAM221AA4D161 298 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 SLC35F4A4IF30 521 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 FAM221BA6H8Z2 402 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 CCDC85CA6NKD9 419 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 J3QW42 95 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 BPNT1O95861 308 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 CD33P20138 364 aa6.75□□□□□ -1.33
KRT39-202ENST00000578029 BMP6P22004 513 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms