RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 KLF18A0A0U1RQI7 1052 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 GOLGA8BA8MQT2 603 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 POLR3DP05423 398 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-212ENST00000573126 TPM3P06753 285 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-212ENST00000573126 ITGA6P23229 1130 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 MCAMP43121 646 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 ZNF75DP51815 510 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 APPBP2Q92624 585 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 FBXW7Q969H0 707 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
RPAIN-212ENST00000573126 CSF1RP07333 972 aa13.13□□□□□ -0.31
RPAIN-212ENST00000573126 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
RPAIN-212ENST00000573126 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
RPAIN-212ENST00000573126 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-212ENST00000573126 DENND2AQ9ULE3 1009 aa13.13□□□□□ -0.31
RPAIN-212ENST00000573126 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
RPAIN-212ENST00000573126 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
RPAIN-212ENST00000573126 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
RPAIN-212ENST00000573126 ZNF213O14771 459 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 STARD3NLO95772 234 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 ANTXR2P58335 489 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 GLIPR1L2Q4G1C9 344 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
RPAIN-212ENST00000573126 MB21D2Q8IYB1 491 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-212ENST00000573126 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 HPS5Q9UPZ3 1129 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 GOLGA6L19H0YKK7 550 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 CPLX1O14810 134 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 TTLL11Q8NHH1 800 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 RIPOR2Q9Y4F9 1068 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
RPAIN-212ENST00000573126 EVCP57679 992 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 IQCB1Q15051 598 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 NLRP10Q86W26 655 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 ENGASEQ8NFI3 743 aa13.12□□□□□ -0.31
RPAIN-212ENST00000573126 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-212ENST00000573126 STX1AQ16623 288 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 PAPPAQ13219 1627 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 CCDC144BQ3MJ40 725 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
RPAIN-212ENST00000573126 SYTL4Q96C24 671 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-212ENST00000573126 BECN2A8MW95 431 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 CTAGE5O15320 804 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 APPP05067 770 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 RXRAP19793 462 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 CTSWP56202 376 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 CAVIN2O95810 425 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 STK38Q15208 465 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 FBXO18Q8NFZ0 1043 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 MRPS27Q92552 414 aaKnown RBP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPAIN-212ENST00000573126 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 BTG4Q9NY30 223 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
RPAIN-212ENST00000573126 SPEF2Q9C093 1822 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 NDUFA8P51970 172 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-212ENST00000573126 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
RPAIN-212ENST00000573126 C16orf45Q96MC5 204 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-212ENST00000573126 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
RPAIN-212ENST00000573126 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 KIF28PB7ZC32 967 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 ADD2P35612 726 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 PHKA1P46020 1223 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-212ENST00000573126 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms