RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 CAMTA2O94983 1202 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 TM4SF1P30408 202 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 NFIXQ14938 502 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 GPR162Q16538 588 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 PROSER3Q2NL68 480 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 TBC1D9BQ66K14 1250 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 MTMR14Q8NCE2 650 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 TSR2Q969E8 191 aaKnown RBP7.53□□□□□ -1.2
CDH13-206ENST00000562601 BABAM1Q9NWV8 329 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 CD2APQ9Y5K6 639 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
CDH13-206ENST00000562601 NUP98P52948 1817 aa7.52□□□□□ -1.2
CDH13-206ENST00000562601 SCN7AQ01118 1682 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 A0A0G2JLW4 131 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 MAGEB6P1A0A0J9YX57 407 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 FAM177BA6PVY3 158 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 SIAH2O43255 324 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 GNAI1P63096 354 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 HLFQ16534 295 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 TTLL7Q6ZT98 887 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 ZBTB33Q86T24 672 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 EPS8L1Q8TE68 723 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 SNRKQ9NRH2 765 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 CDV3Q9UKY7 258 aaKnown RBP7.52□□□□□ -1.21
CDH13-206ENST00000562601 WASF2Q9Y6W5 498 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 UTRNP46939 3433 aa7.52□□□□□ -1.21
CDH13-206ENST00000562601 SERPINB2P05120 415 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 DPEP1P16444 411 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 YBX3P16989 372 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDH13-206ENST00000562601 CALD1Q05682 793 aaKnown RBP7.51□□□□□ -1.21
CDH13-206ENST00000562601 AIMP1Q12904 312 aaKnown RBP7.51□□□□□ -1.21
CDH13-206ENST00000562601 FLIIQ13045 1269 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 DUSP27Q5VZP5 1158 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 TRMT44Q8IYL2 757 aaKnown RBP7.51□□□□□ -1.21
CDH13-206ENST00000562601 C8orf58Q8NAV2 365 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 ZNF592Q92610 1267 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 C1QTNF2Q9BXJ5 285 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 CHPF2Q9P2E5 772 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 KIAA1551Q9HCM1 1747 aa7.51□□□□□ -1.21
CDH13-206ENST00000562601 TCERG1O14776 1098 aaKnown RBP7.5□□□□□ -1.21
CDH13-206ENST00000562601 CHRNA5P30532 468 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 CCDC27Q2M243 656 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 KIF6Q6ZMV9 814 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 TSPYL6Q8N831 410 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 CDK15Q96Q40 435 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 SETDB2Q96T68 719 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 MAP4K5Q9Y4K4 846 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 TLL2Q9Y6L7 1015 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 C10orf71Q711Q0 1435 aa7.5□□□□□ -1.21
CDH13-206ENST00000562601 CARMIL3Q8ND23 1372 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 CCER2I3L3R5 266 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 NPHP1O15259 732 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 SMPD1P17405 629 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 GPTP24298 496 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 MCM6Q14566 821 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 CTC1Q2NKJ3 1217 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 COPS6Q7L5N1 327 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 XAGE3Q8WTP9 111 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 NIP7Q9Y221 180 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDH13-206ENST00000562601 NRXN2Q9P2S2 1712 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 ANKRD31Q8N7Z5 1873 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 MAP3K15Q6ZN16 1313 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
CDH13-206ENST00000562601 ZBBXA8MT70 800 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 J3QL48 77 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 ADH1CP00326 375 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 AVPP01185 164 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 KCNA3P22001 575 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 TGFB2P61812 414 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 CACNA1SQ13698 1873 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 ARID5BQ14865 1188 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 ERFEQ4G0M1 354 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 PRR5LQ6MZQ0 368 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 CLEC4GQ6UXB4 293 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 ERICH6Q7L0X2 663 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 NBPF5PQ86XG9 351 aaPredicted RBP7.48□□□□□ -1.21
CDH13-206ENST00000562601 WDR63Q8IWG1 891 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 DDX21Q9NR30 783 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDH13-206ENST00000562601 BCS1LQ9Y276 419 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 ZNF652Q9Y2D9 606 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 CHD4Q14839 1912 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 FANCIQ9NVI1 1328 aa7.48□□□□□ -1.21
CDH13-206ENST00000562601 BRCA1P38398 1863 aaKnown RBP7.47□□□□□ -1.21
CDH13-206ENST00000562601 ERVV-1B6SEH8 477 aa7.47□□□□□ -1.21
CDH13-206ENST00000562601 EXOSC9Q06265 439 aaKnown RBP7.47□□□□□ -1.21
CDH13-206ENST00000562601 NR5A1Q13285 461 aa7.47□□□□□ -1.21
CDH13-206ENST00000562601 VASH1Q7L8A9 365 aaPredicted RBP7.47□□□□□ -1.21
CDH13-206ENST00000562601 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
CDH13-206ENST00000562601 CNBD1Q8NA66 436 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms