RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 IGLV1-40P01703 118 aa9.56□□□□□ -0.88
HMBOX1-216ENST00000561377 GLYCTKQ8IVS8 523 aa9.56□□□□□ -0.88
HMBOX1-216ENST00000561377 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
HMBOX1-216ENST00000561377 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
HMBOX1-216ENST00000561377 BRPF3Q9ULD4 1205 aa9.56□□□□□ -0.88
HMBOX1-216ENST00000561377 H3BRB1 525 aa9.55□□□□□ -0.88
HMBOX1-216ENST00000561377 VN1R5Q7Z5H4 357 aa9.55□□□□□ -0.88
HMBOX1-216ENST00000561377 TUT1Q9H6E5 874 aaKnown RBP9.55□□□□□ -0.88
HMBOX1-216ENST00000561377 SOX1O00570 391 aaPredicted RBP9.54□□□□□ -0.88
HMBOX1-216ENST00000561377 SERPINB4P48594 390 aa9.54□□□□□ -0.88
HMBOX1-216ENST00000561377 PEAR1Q5VY43 1037 aaPredicted RBP9.54□□□□□ -0.88
HMBOX1-216ENST00000561377 FDX2Q6P4F2 183 aa9.54□□□□□ -0.88
HMBOX1-216ENST00000561377 SOX17Q9H6I2 414 aaPredicted RBP9.54□□□□□ -0.88
HMBOX1-216ENST00000561377 LATS2Q9NRM7 1088 aa9.54□□□□□ -0.88
HMBOX1-216ENST00000561377 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
HMBOX1-216ENST00000561377 NEFLP07196 543 aa9.53□□□□□ -0.88
HMBOX1-216ENST00000561377 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.53□□□□□ -0.88
HMBOX1-216ENST00000561377 HIF3AQ9Y2N7 669 aa9.53□□□□□ -0.88
HMBOX1-216ENST00000561377 MEGF11A6BM72 1044 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 NDUFB5O43674 189 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 PDE4CQ08493 712 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 HGSNATQ68CP4 663 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 ARID3AQ99856 593 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 C7orf69Q9H7B7 122 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 PCMTD2Q9NV79 361 aa9.52□□□□□ -0.89
HMBOX1-216ENST00000561377 POLR3DP05423 398 aaPredicted RBP9.51□□□□□ -0.89
HMBOX1-216ENST00000561377 ESRRAP11474 423 aaPredicted RBP9.51□□□□□ -0.89
HMBOX1-216ENST00000561377 PREPP48147 710 aa9.51□□□□□ -0.89
HMBOX1-216ENST00000561377 NFIAQ12857 509 aa9.51□□□□□ -0.89
HMBOX1-216ENST00000561377 CLEC10AQ8IUN9 316 aa9.51□□□□□ -0.89
HMBOX1-216ENST00000561377 FAM20CQ8IXL6 584 aa9.51□□□□□ -0.89
HMBOX1-216ENST00000561377 GAS2O43903 313 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 BMP3P12645 472 aa9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 RNF43Q68DV7 783 aa9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 TRIM42Q8IWZ5 723 aa9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 GALNT12Q8IXK2 581 aa9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 USP26Q9BXU7 913 aa9.5□□□□□ -0.89
HMBOX1-216ENST00000561377 HMX2A2RU54 273 aa9.49□□□□□ -0.89
HMBOX1-216ENST00000561377 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
HMBOX1-216ENST00000561377 FAM83CQ9BQN1 747 aa9.49□□□□□ -0.89
HMBOX1-216ENST00000561377 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
HMBOX1-216ENST00000561377 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
HMBOX1-216ENST00000561377 CYP4F12Q9HCS2 524 aa9.49□□□□□ -0.89
HMBOX1-216ENST00000561377 SSTR4P31391 388 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 ECM1Q16610 540 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 BEND4Q6ZU67 534 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 CCNJLQ8IV13 435 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 CITED4Q96RK1 184 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 TMPRSS13Q9BYE2 586 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 LIN7BQ9HAP6 207 aa9.48□□□□□ -0.89
HMBOX1-216ENST00000561377 A0A096LPE4 126 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 LOC100289279A0A1B0GTE1 492 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 A0A1W2PP55 124 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 A0A1W2PPZ6 126 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 COBLO75128 1261 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 CD97P48960 835 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 ARHGAP4P98171 946 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 GSTM4Q03013 218 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 ZDHHC13Q8IUH4 622 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 C12orf50Q8NA57 414 aaPredicted RBP9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 SMG8Q8ND04 991 aaKnown RBP9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 SUGCTQ9HAC7 445 aa9.47□□□□□ -0.89
HMBOX1-216ENST00000561377 TGFB1P01137 390 aa9.46□□□□□ -0.9
HMBOX1-216ENST00000561377 FAM129BQ96TA1 746 aa9.46□□□□□ -0.9
HMBOX1-216ENST00000561377 CLEC4MQ9H2X3 399 aaPredicted RBP9.46□□□□□ -0.9
HMBOX1-216ENST00000561377 GRIK1P39086 918 aa9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 EXOSC6Q5RKV6 272 aaKnown RBP9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 KIAA0319Q5VV43 1072 aa9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 PSMG3-AS1Q96PY0 264 aa9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 TCF12Q99081 682 aa9.45□□□□□ -0.9
HMBOX1-216ENST00000561377 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-216ENST00000561377 CPNE3O75131 537 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-216ENST00000561377 MAP4P27816 1152 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-216ENST00000561377 INTS5Q6P9B9 1019 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-216ENST00000561377 CCER1Q8TC90 406 aaPredicted RBP9.44□□□□□ -0.9
HMBOX1-216ENST00000561377 TIAF1O95411 115 aa9.43□□□□□ -0.9
HMBOX1-216ENST00000561377 RXRBP28702 533 aa9.43□□□□□ -0.9
HMBOX1-216ENST00000561377 GRIA4P48058 902 aa9.43□□□□□ -0.9
HMBOX1-216ENST00000561377 HP1BP3Q5SSJ5 553 aaPredicted RBP9.43□□□□□ -0.9
HMBOX1-216ENST00000561377 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
HMBOX1-216ENST00000561377 KRTAP4-8Q9BYQ9 185 aa9.43□□□□□ -0.9
HMBOX1-216ENST00000561377 KIAA1324LA8MWY0 1029 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 CYP11A1P05108 521 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 ORC1Q13415 861 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 SPRED3Q2MJR0 410 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 SGO2Q562F6 1265 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 GIMAP7Q8NHV1 300 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 SHKBP1Q8TBC3 707 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 DDX54Q8TDD1 881 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 EHD4Q9H223 541 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 ZFYVE1Q9HBF4 777 aa9.42□□□□□ -0.9
HMBOX1-216ENST00000561377 DLGAP3O95886 979 aa9.41□□□□□ -0.9
HMBOX1-216ENST00000561377 ZNF423Q2M1K9 1284 aa9.41□□□□□ -0.9
HMBOX1-216ENST00000561377 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms