RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 PRC1O43663 620 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 ANTXR2P58335 489 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
CRTC3-210ENST00000560927 SPC24Q8NBT2 197 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
CRTC3-210ENST00000560927 TERF1P54274 439 aa17.14■□□□□ 0.34
CRTC3-210ENST00000560927 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.34
CRTC3-210ENST00000560927 DENND2AQ9ULE3 1009 aa17.14■□□□□ 0.34
CRTC3-210ENST00000560927 KIF3AQ9Y496 699 aa17.14■□□□□ 0.34
CRTC3-210ENST00000560927 UBN2Q6ZU65 1347 aa17.14■□□□□ 0.33
CRTC3-210ENST00000560927 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
CRTC3-210ENST00000560927 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
CRTC3-210ENST00000560927 PIBF1Q8WXW3 757 aa17.14■□□□□ 0.33
CRTC3-210ENST00000560927 AKAP11Q9UKA4 1901 aa17.14■□□□□ 0.33
CRTC3-210ENST00000560927 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
CRTC3-210ENST00000560927 HPS5Q9UPZ3 1129 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 MYH15Q9Y2K3 1946 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 KLF18A0A0U1RQI7 1052 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 ZNF213O14771 459 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 ADD2P35612 726 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
CRTC3-210ENST00000560927 NBPF3Q9H094 633 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 KCNF1Q9H3M0 494 aa17.13■□□□□ 0.33
CRTC3-210ENST00000560927 PDE8BO95263 885 aa17.12■□□□□ 0.33
CRTC3-210ENST00000560927 PHKA1P46020 1223 aa17.12■□□□□ 0.33
CRTC3-210ENST00000560927 SASS6Q6UVJ0 657 aa17.12■□□□□ 0.33
CRTC3-210ENST00000560927 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
CRTC3-210ENST00000560927 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
CRTC3-210ENST00000560927 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
CRTC3-210ENST00000560927 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
CRTC3-210ENST00000560927 HELBQ8NG08 1087 aaPredicted RBP17.12■□□□□ 0.33
CRTC3-210ENST00000560927 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
CRTC3-210ENST00000560927 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.12■□□□□ 0.33
CRTC3-210ENST00000560927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
CRTC3-210ENST00000560927 PDE8AO60658 829 aa17.11■□□□□ 0.33
CRTC3-210ENST00000560927 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
CRTC3-210ENST00000560927 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
CRTC3-210ENST00000560927 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
CRTC3-210ENST00000560927 EXOC5O00471 708 aa17.11■□□□□ 0.33
CRTC3-210ENST00000560927 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
CRTC3-210ENST00000560927 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
CRTC3-210ENST00000560927 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
CRTC3-210ENST00000560927 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
CRTC3-210ENST00000560927 MYH7P12883 1935 aa17.11■□□□□ 0.33
CRTC3-210ENST00000560927 SLIT2O94813 1529 aa17.11■□□□□ 0.33
CRTC3-210ENST00000560927 ANKRD36CQ5JPF3 1778 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 UQCRHLA0A096LP55 91 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 UQCRHP07919 91 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 ZNF165P49910 485 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 NUP98P52948 1817 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 SNAP23O00161 211 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 TBC1D10CQ8IV04 446 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 PYCARDQ9ULZ3 195 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 MYH3P11055 1940 aa17.1■□□□□ 0.33
CRTC3-210ENST00000560927 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ME1P48163 572 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ZNF532Q9HCE3 1301 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 A0A087WWV3 80 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 IL6STP40189 918 aaPredicted RBP17.09■□□□□ 0.33
CRTC3-210ENST00000560927 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ATL3Q6DD88 541 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
CRTC3-210ENST00000560927 TDRD7Q8NHU6 1098 aaKnown RBP17.09■□□□□ 0.33
CRTC3-210ENST00000560927 FAM177BA6PVY3 158 aa17.08■□□□□ 0.33
CRTC3-210ENST00000560927 APPP05067 770 aa17.08■□□□□ 0.33
CRTC3-210ENST00000560927 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.33
CRTC3-210ENST00000560927 ARID4AP29374 1257 aaPredicted RBP17.08■□□□□ 0.33
CRTC3-210ENST00000560927 TTF1Q15361 905 aaPredicted RBP17.08■□□□□ 0.33
CRTC3-210ENST00000560927 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.33
CRTC3-210ENST00000560927 C8orf76Q96K31 380 aa17.08■□□□□ 0.33
CRTC3-210ENST00000560927 ORC3Q9UBD5 711 aaPredicted RBP17.08■□□□□ 0.33
CRTC3-210ENST00000560927 ATRNO75882 1429 aa17.08■□□□□ 0.33
CRTC3-210ENST00000560927 PDE6AP16499 860 aa17.08■□□□□ 0.32
CRTC3-210ENST00000560927 HSP90AA2PQ14568 343 aaPredicted RBP17.08■□□□□ 0.32
CRTC3-210ENST00000560927 CYB5R4Q7L1T6 521 aa17.08■□□□□ 0.32
CRTC3-210ENST00000560927 DDX60Q8IY21 1712 aaKnown RBP17.08■□□□□ 0.32
CRTC3-210ENST00000560927 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
CRTC3-210ENST00000560927 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.32
CRTC3-210ENST00000560927 TCRBV5S4A2TA0A5A2 114 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 FGFR2P21802 821 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 PTGS1P23219 599 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 PUM3Q15397 648 aaKnown RBP17.07■□□□□ 0.32
CRTC3-210ENST00000560927 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 ERCC4Q92889 916 aaPredicted RBP17.07■□□□□ 0.32
CRTC3-210ENST00000560927 SPTLC3Q9NUV7 552 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
CRTC3-210ENST00000560927 COL14A1Q05707 1796 aaKnown RBP17.07■□□□□ 0.32
CRTC3-210ENST00000560927 CPLX1O14810 134 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms