RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 LBX1P52954 281 aa10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 RNF123Q5XPI4 1314 aa10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 ZNF598Q86UK7 904 aaKnown RBP10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 PNMA8AQ86V59 439 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 ADAMTSL1Q8N6G6 1762 aa10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 MIS18AQ9NYP9 233 aa10.71□□□□□ -0.69
CTDSPL2-208ENST00000559793 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 GPC2Q8N158 579 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 CFAP53Q96M91 514 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 NUP98P52948 1817 aa10.7□□□□□ -0.7
CTDSPL2-208ENST00000559793 SNED1Q8TER0 1413 aa10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 FMR1Q06787 632 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 PTPRNQ16849 979 aa10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 RTL5Q5HYW3 569 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 PSMD1Q99460 953 aa10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTDSPL2-208ENST00000559793 WDR33Q9C0J8 1336 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 PPP2R1AP30153 589 aa10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 TTLL7Q6ZT98 887 aa10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 JDP2Q8WYK2 163 aa10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 GOPCQ9HD26 462 aa10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 GJA3Q9Y6H8 435 aa10.68□□□□□ -0.7
CTDSPL2-208ENST00000559793 COL4A5P29400 1685 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 ERVV-1B6SEH8 477 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 CD2BP2O95400 341 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 CCNYL3P0C7X3 344 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 EPS15P42566 896 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 CC2D2BQ6DHV5 1058 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 LYPD8Q6UX82 237 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 RRP7AQ9Y3A4 280 aaKnown RBP10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
CTDSPL2-208ENST00000559793 ABCC12Q96J65 1359 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 TCERG1O14776 1098 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 GPTP24298 496 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 SCNN1DP51172 638 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 EIF6P56537 245 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 MAP2K1Q02750 393 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 SUSD4Q5VX71 490 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 CST9Q5W186 159 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 ABHD8Q96I13 439 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 EVA1BQ9NVM1 165 aa10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 ABT1Q9ULW3 272 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-208ENST00000559793 DLG5Q8TDM6 1919 aa10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 EIF4A1P60842 406 aaKnown RBP10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 TRIM67Q6ZTA4 783 aa10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 ZNF34Q8IZ26 560 aa10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 RPGRQ92834 1020 aaKnown RBP10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 CRAMP1Q96RY5 1269 aa10.65□□□□□ -0.7
CTDSPL2-208ENST00000559793 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 TRPM7Q96QT4 1865 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 TRAF5O00463 557 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 MYL6BP14649 208 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 TRIM32Q13049 653 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 PPP2R2DQ66LE6 453 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 USP50Q70EL3 339 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 RBM17Q96I25 401 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 CAPNS2Q96L46 248 aa10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 GPR101Q96P66 508 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-208ENST00000559793 GFRA3O60609 400 aa10.63□□□□□ -0.71
CTDSPL2-208ENST00000559793 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
CTDSPL2-208ENST00000559793 CYP4F22Q6NT55 531 aa10.63□□□□□ -0.71
CTDSPL2-208ENST00000559793 KIF6Q6ZMV9 814 aa10.63□□□□□ -0.71
CTDSPL2-208ENST00000559793 PNISRQ8TF01 805 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-208ENST00000559793 THUMPD2Q9BTF0 503 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-208ENST00000559793 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 RIC1Q4ADV7 1423 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 GDF9O60383 454 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 NTSR2O95665 410 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 CXCL9Q07325 125 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 GRM1Q13255 1194 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 LAPTM4AQ15012 233 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 SLC10A5Q5PT55 438 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 TSC1Q92574 1164 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 PLEKHF1Q96S99 279 aa10.62□□□□□ -0.71
CTDSPL2-208ENST00000559793 KDM3BQ7LBC6 1761 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms