RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 STRCP1A6NGW2 1772 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 BECN2A8MW95 431 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 ISCA1Q9BUE6 129 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 CTNNA3Q9UI47 895 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 SMTNL1A8MU46 457 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 CCDC158Q5M9N0 1113 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 MB21D2Q8IYB1 491 aaPredicted RBP19.37■□□□□ 0.69
SPG11-215ENST00000559193 SMAP1Q8IYB5 467 aaPredicted RBP19.37■□□□□ 0.69
SPG11-215ENST00000559193 HPS5Q9UPZ3 1129 aa19.37■□□□□ 0.69
SPG11-215ENST00000559193 TNS2Q63HR2 1409 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 IMMTQ16891 758 aaKnown RBP19.36■□□□□ 0.69
SPG11-215ENST00000559193 HSP90AB3PQ58FF7 597 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 PPP4R3BQ5MIZ7 849 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 ADALQ6DHV7 355 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 A0A1W2PQ27 194 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 A0A1W2PQ64 194 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 A0A1W2PQD8 194 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 PRC1O43663 620 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 FGAP02671 866 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 ANTXR2P58335 489 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 CEP57L1Q8IYX8 460 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 PDCL2Q8N4E4 241 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 AOPEPQ8N6M6 819 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 LINC00301Q8NCQ3 95 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 CLIC4Q9Y696 253 aa19.36■□□□□ 0.69
SPG11-215ENST00000559193 DDX60Q8IY21 1712 aaKnown RBP19.35■□□□□ 0.69
SPG11-215ENST00000559193 KLF18A0A0U1RQI7 1052 aa19.35■□□□□ 0.69
SPG11-215ENST00000559193 A0A1B0GVL5 298 aa19.35■□□□□ 0.69
SPG11-215ENST00000559193 ZFYP08048 801 aaPredicted RBP19.35■□□□□ 0.69
SPG11-215ENST00000559193 TPD52L1Q16890 204 aaPredicted RBP19.35■□□□□ 0.69
SPG11-215ENST00000559193 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
SPG11-215ENST00000559193 GORABQ5T7V8 394 aa19.35■□□□□ 0.69
SPG11-215ENST00000559193 GOLGA8BA8MQT2 603 aa19.35■□□□□ 0.69
SPG11-215ENST00000559193 NDUFA8P51970 172 aa19.35■□□□□ 0.69
SPG11-215ENST00000559193 RBM6P78332 1123 aaKnown RBP19.35■□□□□ 0.69
SPG11-215ENST00000559193 C8orf76Q96K31 380 aa19.35■□□□□ 0.69
SPG11-215ENST00000559193 PUS7LQ9H0K6 701 aaKnown RBP19.35■□□□□ 0.69
SPG11-215ENST00000559193 NEDD4P46934 1319 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 NEMFO60524 1076 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 ZAP70P43403 619 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
SPG11-215ENST00000559193 APPBP2Q92624 585 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 AKAP2Q9Y2D5 859 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 NCBP1Q09161 790 aaKnown RBP19.34■□□□□ 0.69
SPG11-215ENST00000559193 ATP2B3Q16720 1220 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 RAB11FIP4Q86YS3 637 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 FBXW7Q969H0 707 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 CCDC85AQ96PX6 553 aaPredicted RBP19.34■□□□□ 0.69
SPG11-215ENST00000559193 FBXO3Q9UK99 471 aa19.34■□□□□ 0.69
SPG11-215ENST00000559193 USP27XA6NNY8 438 aa19.33■□□□□ 0.69
SPG11-215ENST00000559193 POLR3DP05423 398 aaPredicted RBP19.33■□□□□ 0.69
SPG11-215ENST00000559193 TCIRG1Q13488 830 aa19.33■□□□□ 0.69
SPG11-215ENST00000559193 STK38Q15208 465 aa19.33■□□□□ 0.69
SPG11-215ENST00000559193 PI16Q6UXB8 463 aa19.33■□□□□ 0.69
SPG11-215ENST00000559193 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.69
SPG11-215ENST00000559193 POLR3EQ9NVU0 708 aa19.33■□□□□ 0.69
SPG11-215ENST00000559193 ORC3Q9UBD5 711 aaPredicted RBP19.33■□□□□ 0.69
SPG11-215ENST00000559193 CCZ1BP86790 482 aa19.33■□□□□ 0.68
SPG11-215ENST00000559193 CCZ1P86791 482 aaPredicted RBP19.33■□□□□ 0.68
SPG11-215ENST00000559193 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.68
SPG11-215ENST00000559193 GJB4Q9NTQ9 266 aa19.33■□□□□ 0.68
SPG11-215ENST00000559193 CCDC69A6NI79 296 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 YEATS4O95619 227 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 MYSM1Q5VVJ2 828 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 PAXBP1Q9Y5B6 917 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 KIF28PB7ZC32 967 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 SKILP12757 684 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 FILIP1Q7Z7B0 1213 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 NCOA7Q8NI08 942 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 NAT10Q9H0A0 1025 aaKnown RBP19.32■□□□□ 0.68
SPG11-215ENST00000559193 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
SPG11-215ENST00000559193 SHANK3Q9BYB0 1731 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 GPAA1O43292 621 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 DHX16O60231 1041 aaKnown RBP19.31■□□□□ 0.68
SPG11-215ENST00000559193 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
SPG11-215ENST00000559193 DPCR1Q3MIW9 517 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 FAM89AQ96GI7 184 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 COL5A2P05997 1499 aaPredicted RBP19.31■□□□□ 0.68
SPG11-215ENST00000559193 SPTLC2O15270 562 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 SYCP1Q15431 976 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 BRAPQ7Z569 592 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 KIAA1468Q9P260 1216 aa19.31■□□□□ 0.68
SPG11-215ENST00000559193 C4AP0C0L4 1744 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 C4BP0C0L5 1744 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 PCCAP05165 728 aaPredicted RBP19.3■□□□□ 0.68
SPG11-215ENST00000559193 CEP135Q66GS9 1140 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 RALYLQ86SE5 291 aaKnown RBP19.3■□□□□ 0.68
SPG11-215ENST00000559193 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 PLA2G12BQ9BX93 195 aa19.3■□□□□ 0.68
SPG11-215ENST00000559193 ZNF330Q9Y3S2 320 aaPredicted RBP19.3■□□□□ 0.68
SPG11-215ENST00000559193 CSF1RP07333 972 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms