RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 CHST12Q9NRB3 414 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 VIL1P09327 827 aaKnown RBP8.73□□□□□ -1.01
TGFB3-202ENST00000554980 C7P10643 843 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 RFX1P22670 979 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 R3HDM1Q15032 1099 aaKnown RBP8.73□□□□□ -1.01
TGFB3-202ENST00000554980 ARMC3Q5W041 872 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 FILIP1Q7Z7B0 1213 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 CCDC34Q96HJ3 373 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.73□□□□□ -1.01
TGFB3-202ENST00000554980 MAGEA8P43361 318 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 PDXDC1Q6P996 788 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 TEX13AQ9BXU3 409 aaPredicted RBP8.72□□□□□ -1.01
TGFB3-202ENST00000554980 OVOS2A0A0G2JMS6 1433 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 ABCC6O95255 1503 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 IFRD1O00458 451 aaPredicted RBP8.72□□□□□ -1.01
TGFB3-202ENST00000554980 RGS20O76081 388 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 IL2RBP14784 551 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 ZBED6P86452 979 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 C9orf131Q5VYM1 1079 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 SUGP1Q8IWZ8 645 aaKnown RBP8.72□□□□□ -1.01
TGFB3-202ENST00000554980 UHMK1Q8TAS1 419 aaKnown RBP8.72□□□□□ -1.01
TGFB3-202ENST00000554980 RWDD1Q9H446 243 aaPredicted RBP8.72□□□□□ -1.01
TGFB3-202ENST00000554980 USP25Q9UHP3 1055 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 CCDC7Q96M83 1385 aa8.72□□□□□ -1.01
TGFB3-202ENST00000554980 FAM208AQ9UK61 1670 aaKnown RBP8.72□□□□□ -1.01
TGFB3-202ENST00000554980 SEPT2Q15019 361 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 DDX54Q8TDD1 881 aaKnown RBP8.71□□□□□ -1.01
TGFB3-202ENST00000554980 GLMNQ92990 594 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 CCDC102AQ96A19 550 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 ERP27Q96DN0 273 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 CDHR1Q96JP9 859 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 KIF7Q2M1P5 1343 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 MEGF6O75095 1541 aa8.71□□□□□ -1.01
TGFB3-202ENST00000554980 TNS2Q63HR2 1409 aa8.71□□□□□ -1.02
TGFB3-202ENST00000554980 ECEL1O95672 775 aa8.71□□□□□ -1.02
TGFB3-202ENST00000554980 NFE2L2Q16236 605 aa8.71□□□□□ -1.02
TGFB3-202ENST00000554980 DNAJC21Q5F1R6 531 aaKnown RBP8.71□□□□□ -1.02
TGFB3-202ENST00000554980 ZCCHC8Q6NZY4 707 aaKnown RBP8.71□□□□□ -1.02
TGFB3-202ENST00000554980 ASAP1Q9ULH1 1129 aa8.71□□□□□ -1.02
TGFB3-202ENST00000554980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 FOSP01100 380 aaPredicted RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 XBP1P17861 261 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 STIP1P31948 543 aaKnown RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 NEK9Q8TD19 979 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 GINM1Q9NU53 330 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 RABL2AQ9UBK7 228 aaPredicted RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 POLKQ9UBT6 870 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 MAFFQ9ULX9 164 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 KNSTRNQ9Y448 316 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 DDX49Q9Y6V7 483 aaKnown RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 MAP2P11137 1827 aaKnown RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 TMEM238LA0A1B0GVL6 79 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 OATP04181 439 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 SETSIPP0DME0 302 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 FXNQ16595 210 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 SYCP2LQ5T4T6 812 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 RNF187Q5TA31 235 aaPredicted RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 IQCEQ6IPM2 695 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 PARP9Q8IXQ6 854 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 PAF1Q8N7H5 531 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 TSR2Q969E8 191 aaKnown RBP8.7□□□□□ -1.02
TGFB3-202ENST00000554980 VMP1Q96GC9 406 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 MKS1Q9NXB0 559 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 ZNF652Q9Y2D9 606 aa8.7□□□□□ -1.02
TGFB3-202ENST00000554980 CCP110O43303 1012 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 PIK3CAP42336 1068 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 ZNF131P52739 623 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 MECOMQ03112 1051 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 DCTN1Q14203 1278 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 ZSWIM4Q9H7M6 989 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 COMMD8Q9NX08 183 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 HOXC10Q9NYD6 342 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 MRPL42Q9Y6G3 142 aaKnown RBP8.69□□□□□ -1.02
TGFB3-202ENST00000554980 CGNL1Q0VF96 1302 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 TULP2O00295 520 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 KCNQ4P56696 695 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 CENPTQ96BT3 561 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 MPP4Q96JB8 637 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 HDAC9Q9UKV0 1011 aa8.69□□□□□ -1.02
TGFB3-202ENST00000554980 POM121CA8CG34 1229 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 PRSS47A8MTI9 375 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 GTF2F1P35269 517 aaKnown RBP eCLIP8.68□□□□□ -1.02
TGFB3-202ENST00000554980 TSPAN7P41732 249 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 RAVER1Q8IY67 606 aaKnown RBP8.68□□□□□ -1.02
TGFB3-202ENST00000554980 CHPFQ8IZ52 775 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 CCDC89Q8N998 374 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 ATRIPQ8WXE1 791 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 C8orf48Q96LL4 319 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 CEP89Q96ST8 783 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 CLIC5Q9NZA1 410 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 NUP188Q5SRE5 1749 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 INSRP06213 1382 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 RREB1Q92766 1687 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 ANKRD18BA2A2Z9 1011 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms