RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 GPAA1O43292 621 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 GYS1P13807 737 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 TM4SF1P30408 202 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 GZF1Q9H116 711 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 BSDC1Q9NW68 430 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 TCHHQ07283 1943 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 BAG4O95429 457 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 PDE6AP16499 860 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 PSMA5P28066 241 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 STK3Q13188 491 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 CHST3Q7LGC8 479 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 NUCB2P80303 420 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 TSGA10IPQ3SY00 556 aa15.2■□□□□ 0.02
VIPAS39-206ENST00000553888 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 INTS4Q96HW7 963 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 CARMIL3Q8ND23 1372 aa15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 MAGEB6Q8N7X4 407 aa15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 GBP4Q96PP9 640 aa15.19■□□□□ 0.02
VIPAS39-206ENST00000553888 TCRBV5S4A2TA0A5A2 114 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 FGAP02671 866 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 ZNF827Q17R98 1081 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 RGL2O15211 777 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 TRAK2O60296 914 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 GSE1Q14687 1217 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 MCTP1Q6DN14 999 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 PRR5LQ6MZQ0 368 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 Q6ZUG5 572 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
VIPAS39-206ENST00000553888 E7EWF7 191 aa15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 TTF1Q15361 905 aaPredicted RBP15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
VIPAS39-206ENST00000553888 APBA3O96018 575 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 JAG2Q9Y219 1238 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 DDR1Q08345 913 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 KRT32Q14532 448 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 GPR101Q96P66 508 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 BRD1O95696 1058 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 FAM84BQ96KN1 310 aaPredicted RBP15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 ABCF2Q9UG63 623 aa15.16■□□□□ 0.02
VIPAS39-206ENST00000553888 ADRA2BP18089 450 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 GJB2P29033 226 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 MIGA1Q8NAN2 632 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 BRF1Q92994 677 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 ARMT1Q9H993 441 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 SMC3Q9UQE7 1217 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 APPP05067 770 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 SERPINB2P05120 415 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
VIPAS39-206ENST00000553888 MBD4O95243 580 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 UBE4AQ14139 1066 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 ZSCAN25Q6NSZ9 544 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 NBPF3Q9H094 633 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 PRKAB2O43741 272 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 PPFIA3O75145 1194 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 TICAM2Q86XR7 235 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 INCENPQ9NQS7 918 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
VIPAS39-206ENST00000553888 MAP3K12Q12852 859 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 CLEC17AQ6ZS10 378 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 ZSCAN31Q96LW9 406 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 RGS17Q9UGC6 210 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 SYT1P21579 422 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 RXRBP28702 533 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 APOBRQ0VD83 1088 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 SH2B1Q9NRF2 756 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 DHX32Q7L7V1 743 aaKnown RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 LCORLQ8N3X6 602 aa15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 EPB41L4AQ9HCS5 686 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
VIPAS39-206ENST00000553888 CHD4Q14839 1912 aa15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 JAK2O60674 1132 aa15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 IMMTQ16891 758 aaKnown RBP15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms