RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 WNT8BQ93098 351 aa9.65□□□□□ -0.86
LETMD1-233ENST00000552433 RNF112Q9ULX5 631 aa9.65□□□□□ -0.86
LETMD1-233ENST00000552433 USTQ9Y2C2 406 aa9.65□□□□□ -0.86
LETMD1-233ENST00000552433 AMOTL2Q9Y2J4 779 aa9.65□□□□□ -0.86
LETMD1-233ENST00000552433 METTL12A8MUP2 240 aa9.64□□□□□ -0.87
LETMD1-233ENST00000552433 H3BRB1 525 aa9.64□□□□□ -0.87
LETMD1-233ENST00000552433 DHX15O43143 795 aaKnown RBP9.64□□□□□ -0.87
LETMD1-233ENST00000552433 ARL4DP49703 201 aa9.64□□□□□ -0.87
LETMD1-233ENST00000552433 C19orf57Q0VDD7 668 aa9.64□□□□□ -0.87
LETMD1-233ENST00000552433 IKBKEQ14164 716 aa9.64□□□□□ -0.87
LETMD1-233ENST00000552433 ECM1Q16610 540 aa9.64□□□□□ -0.87
LETMD1-233ENST00000552433 UTP4Q969X6 686 aaKnown RBP9.64□□□□□ -0.87
LETMD1-233ENST00000552433 FAM46AQ96IP4 442 aaKnown RBP9.64□□□□□ -0.87
LETMD1-233ENST00000552433 TUT1Q9H6E5 874 aaKnown RBP9.64□□□□□ -0.87
LETMD1-233ENST00000552433 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
LETMD1-233ENST00000552433 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
LETMD1-233ENST00000552433 SART1O43290 800 aaKnown RBP9.62□□□□□ -0.87
LETMD1-233ENST00000552433 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
LETMD1-233ENST00000552433 BRPF3Q9ULD4 1205 aa9.62□□□□□ -0.87
LETMD1-233ENST00000552433 HMX2A2RU54 273 aa9.61□□□□□ -0.87
LETMD1-233ENST00000552433 IGLV1-40P01703 118 aa9.61□□□□□ -0.87
LETMD1-233ENST00000552433 SSTR4P31391 388 aa9.61□□□□□ -0.87
LETMD1-233ENST00000552433 USPL1Q5W0Q7 1092 aa9.61□□□□□ -0.87
LETMD1-233ENST00000552433 EGFL7Q9UHF1 273 aa9.61□□□□□ -0.87
LETMD1-233ENST00000552433 BMP3P12645 472 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 PREPP48147 710 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 MYRFLQ96LU7 910 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 BHLHE41Q9C0J9 482 aaPredicted RBP9.6□□□□□ -0.87
LETMD1-233ENST00000552433 RNF208Q9H0X6 261 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 KCNF1Q9H3M0 494 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
LETMD1-233ENST00000552433 ESRRAP11474 423 aaPredicted RBP9.59□□□□□ -0.87
LETMD1-233ENST00000552433 UVSSAQ2YD98 709 aa9.59□□□□□ -0.87
LETMD1-233ENST00000552433 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
LETMD1-233ENST00000552433 A0A1W2PP55 124 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 DLGAP3O95886 979 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 ARHGAP4P98171 946 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 GSTM4Q03013 218 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 SPRED3Q2MJR0 410 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 FDX2Q6P4F2 183 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 SLC51AQ86UW1 340 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 FAM20CQ8IXL6 584 aa9.58□□□□□ -0.88
LETMD1-233ENST00000552433 TGFB1P01137 390 aa9.57□□□□□ -0.88
LETMD1-233ENST00000552433 ANKRD34AQ69YU3 496 aa9.57□□□□□ -0.88
LETMD1-233ENST00000552433 C12orf50Q8NA57 414 aaPredicted RBP9.57□□□□□ -0.88
LETMD1-233ENST00000552433 PCMTD2Q9NV79 361 aa9.57□□□□□ -0.88
LETMD1-233ENST00000552433 A0A096LPE4 126 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 LOC100289279A0A1B0GTE1 492 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 A0A1W2PPZ6 126 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 MEGF11A6BM72 1044 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 MED26O95402 600 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
LETMD1-233ENST00000552433 GRIA4P48058 902 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 NFIAQ12857 509 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 ORC1Q13415 861 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 BEND4Q6ZU67 534 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 GALNT12Q8IXK2 581 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 LIN7BQ9HAP6 207 aa9.56□□□□□ -0.88
LETMD1-233ENST00000552433 GSC2O15499 205 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 ZNF423Q2M1K9 1284 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.55□□□□□ -0.88
LETMD1-233ENST00000552433 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 CLEC10AQ8IUN9 316 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 CCNJLQ8IV13 435 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 TCF12Q99081 682 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 FAM83CQ9BQN1 747 aa9.55□□□□□ -0.88
LETMD1-233ENST00000552433 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 NDUFB5O43674 189 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 DRD2P14416 443 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 RNF43Q68DV7 783 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 TMPRSS13Q9BYE2 586 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 NISCHQ9Y2I1 1504 aa9.54□□□□□ -0.88
LETMD1-233ENST00000552433 GAS2O43903 313 aaKnown RBP9.53□□□□□ -0.88
LETMD1-233ENST00000552433 PDIA4P13667 645 aaKnown RBP9.53□□□□□ -0.88
LETMD1-233ENST00000552433 PCDH1Q08174 1060 aa9.53□□□□□ -0.88
LETMD1-233ENST00000552433 SGO2Q562F6 1265 aa9.53□□□□□ -0.88
LETMD1-233ENST00000552433 ZDHHC13Q8IUH4 622 aa9.53□□□□□ -0.88
LETMD1-233ENST00000552433 SOX17Q9H6I2 414 aaPredicted RBP9.53□□□□□ -0.88
LETMD1-233ENST00000552433 EXOSC6Q5RKV6 272 aaKnown RBP9.52□□□□□ -0.89
LETMD1-233ENST00000552433 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
LETMD1-233ENST00000552433 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
LETMD1-233ENST00000552433 MAP4P27816 1152 aaKnown RBP9.51□□□□□ -0.89
LETMD1-233ENST00000552433 RXRBP28702 533 aa9.51□□□□□ -0.89
LETMD1-233ENST00000552433 CD97P48960 835 aa9.51□□□□□ -0.89
LETMD1-233ENST00000552433 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
LETMD1-233ENST00000552433 EHD4Q9H223 541 aa9.51□□□□□ -0.89
LETMD1-233ENST00000552433 CLEC4MQ9H2X3 399 aaPredicted RBP9.51□□□□□ -0.89
LETMD1-233ENST00000552433 CYP4F12Q9HCS2 524 aa9.51□□□□□ -0.89
LETMD1-233ENST00000552433 NPHS2Q9NP85 383 aa9.51□□□□□ -0.89
LETMD1-233ENST00000552433 COBLO75128 1261 aa9.5□□□□□ -0.89
LETMD1-233ENST00000552433 CPNE3O75131 537 aaKnown RBP9.5□□□□□ -0.89
LETMD1-233ENST00000552433 NEFLP07196 543 aa9.5□□□□□ -0.89
LETMD1-233ENST00000552433 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
LETMD1-233ENST00000552433 SMG8Q8ND04 991 aaKnown RBP9.5□□□□□ -0.89
LETMD1-233ENST00000552433 SHKBP1Q8TBC3 707 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms