RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 PDE4CQ08493 712 aa9.79□□□□□ -0.84
GNPTAB-208ENST00000550718 IKBKEQ14164 716 aa9.79□□□□□ -0.84
GNPTAB-208ENST00000550718 UBASH3BQ8TF42 649 aa9.79□□□□□ -0.84
GNPTAB-208ENST00000550718 HIF3AQ9Y2N7 669 aa9.79□□□□□ -0.84
GNPTAB-208ENST00000550718 NEFLP07196 543 aa9.78□□□□□ -0.84
GNPTAB-208ENST00000550718 ECM1Q16610 540 aa9.78□□□□□ -0.84
GNPTAB-208ENST00000550718 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.78□□□□□ -0.84
GNPTAB-208ENST00000550718 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
GNPTAB-208ENST00000550718 SOX1O00570 391 aaPredicted RBP9.77□□□□□ -0.85
GNPTAB-208ENST00000550718 SLC7A3Q8WY07 619 aa9.77□□□□□ -0.85
GNPTAB-208ENST00000550718 CITED4Q96RK1 184 aa9.77□□□□□ -0.85
GNPTAB-208ENST00000550718 BRPF3Q9ULD4 1205 aa9.77□□□□□ -0.85
GNPTAB-208ENST00000550718 NLRP12P59046 1061 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 CLEC10AQ8IUN9 316 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 GLYCTKQ8IVS8 523 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 GALNT12Q8IXK2 581 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 FAM20CQ8IXL6 584 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 RUSC1Q9BVN2 902 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 SUGCTQ9HAC7 445 aa9.76□□□□□ -0.85
GNPTAB-208ENST00000550718 SART1O43290 800 aaKnown RBP9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 CD97P48960 835 aa9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 NFIAQ12857 509 aa9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 PDE3BQ13370 1112 aa9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 RNF43Q68DV7 783 aa9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 FAM83CQ9BQN1 747 aa9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 TMPRSS13Q9BYE2 586 aa9.75□□□□□ -0.85
GNPTAB-208ENST00000550718 H3BRB1 525 aa9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 ESRRAP11474 423 aaPredicted RBP9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 FDX2Q6P4F2 183 aa9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 TXNDC2Q86VQ3 553 aa9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 TUT1Q9H6E5 874 aaKnown RBP9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 C7orf69Q9H7B7 122 aa9.74□□□□□ -0.85
GNPTAB-208ENST00000550718 NDUFB5O43674 189 aa9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 PREPP48147 710 aa9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 SERPINB4P48594 390 aa9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 ASAP3Q8TDY4 903 aa9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 DBNDD2Q9BQY9 259 aa9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 LATS2Q9NRM7 1088 aa9.73□□□□□ -0.85
GNPTAB-208ENST00000550718 HGSNATQ68CP4 663 aa9.72□□□□□ -0.85
GNPTAB-208ENST00000550718 TRIM42Q8IWZ5 723 aa9.72□□□□□ -0.85
GNPTAB-208ENST00000550718 FAM129BQ96TA1 746 aa9.72□□□□□ -0.85
GNPTAB-208ENST00000550718 KRTAP4-8Q9BYQ9 185 aa9.72□□□□□ -0.85
GNPTAB-208ENST00000550718 LOC100289279A0A1B0GTE1 492 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 A0A1W2PP55 124 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 BMP3P12645 472 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 ZDHHC13Q8IUH4 622 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 CYP4F12Q9HCS2 524 aa9.71□□□□□ -0.86
GNPTAB-208ENST00000550718 A0A096LPE4 126 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 A0A1W2PPZ6 126 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 HMX2A2RU54 273 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 KIAA1324LA8MWY0 1029 aaPredicted RBP9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 COBLO75128 1261 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 TIAF1O95411 115 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 EXOSC6Q5RKV6 272 aaKnown RBP9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 TCF12Q99081 682 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 CLEC4MQ9H2X3 399 aaPredicted RBP9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 PCMTD2Q9NV79 361 aa9.7□□□□□ -0.86
GNPTAB-208ENST00000550718 BEND4Q6ZU67 534 aa9.69□□□□□ -0.86
GNPTAB-208ENST00000550718 NRSN2Q9GZP1 204 aa9.69□□□□□ -0.86
GNPTAB-208ENST00000550718 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
GNPTAB-208ENST00000550718 PSMG3-AS1Q96PY0 264 aa9.68□□□□□ -0.86
GNPTAB-208ENST00000550718 DNAJC25Q9H1X3 360 aa9.68□□□□□ -0.86
GNPTAB-208ENST00000550718 LIN7BQ9HAP6 207 aa9.68□□□□□ -0.86
GNPTAB-208ENST00000550718 ZFYVE1Q9HBF4 777 aa9.68□□□□□ -0.86
GNPTAB-208ENST00000550718 METTL12A8MUP2 240 aa9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 GAS2O43903 313 aaKnown RBP9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 CPNE3O75131 537 aaKnown RBP9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 PCDH1Q08174 1060 aa9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 HP1BP3Q5SSJ5 553 aaPredicted RBP9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 RETREG2Q8NC44 543 aa9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
GNPTAB-208ENST00000550718 TGFB1P01137 390 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 IGHA2P01877 340 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 CYP11A1P05108 521 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 GRIK1P39086 918 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 GRIA4P48058 902 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 GSTM4Q03013 218 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 PTPN12Q05209 780 aaKnown RBP9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 C12orf50Q8NA57 414 aaPredicted RBP9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 KCNF1Q9H3M0 494 aa9.66□□□□□ -0.86
GNPTAB-208ENST00000550718 PRR19A6NJB7 356 aa9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 DLGAP3O95886 979 aa9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 ITPKAP23677 461 aa9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 MAP4P27816 1152 aaKnown RBP9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 SSTR4P31391 388 aa9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 ALKBH8Q96BT7 664 aaKnown RBP9.65□□□□□ -0.86
GNPTAB-208ENST00000550718 B3GALT4O96024 378 aa9.64□□□□□ -0.87
GNPTAB-208ENST00000550718 CPSF6Q16630 551 aaKnown RBP eCLIP9.64□□□□□ -0.87
GNPTAB-208ENST00000550718 ZNF423Q2M1K9 1284 aa9.64□□□□□ -0.87
GNPTAB-208ENST00000550718 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
GNPTAB-208ENST00000550718 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
GNPTAB-208ENST00000550718 SPRED3Q2MJR0 410 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms